grant

Volumetric analysis of epithelial morphogenesis with high spatiotemporal resolution

Organization UNIVERSITY OF DENVER (COLORADO SEMINARY)Location DENVER, UNITED STATESPosted 1 Apr 2023Deadline 31 Jan 2027
NIHUS FederalResearch GrantFY202521+ years old3-D3-D analysis3-Dimensional3-dimensional analysis3D3D analysisActin-Activated ATPaseActinsActomyosinAddressAdhesivesAdoptedAdultAdult HumanAffectApicalArchitectureAreaAutomobile DrivingAutoregulationBasal LayerBehaviorBiologic ModelsBiological ModelsBody TissuesCell AgingCell BodyCell LocomotionCell MigrationCell MovementCell SenescenceCell ShapeCell VolumesCell surfaceCellsCellular AgingCellular MigrationCellular MotilityCellular SenescenceCellular biologyColumnar EpitheliumComputational toolkitComputer AnalysisCoupledCytoplasmDark CellDataData SetDevelopmentDimensionsDiseaseDisorderDrosophilaDrosophila genusElasticityEmbryoEmbryonicEngineering / ArchitectureEnvironmentEpithelial CellsEpitheliumEventF-ActinFilamentous ActinFliesGastrulaGeneralized GrowthGenerationsGoalsGrowthHomeostasisImageIndividualIntercalated CellKnowledgeLateralLifeLightLocationMapsMeasurementMeasuresMechanicsMethodsMicroscopyModel SystemMolecularMolecular ConfigurationMolecular ConformationMolecular StereochemistryMorphogenesisMorphologyMovementMyosin ATPaseMyosin Adenosine TriphosphataseMyosin AdenosinetriphosphataseMyosin IIMyosin Type IIMyosinsNaturePhotoradiationPhysiological HomeostasisPopulationPopulation DistributionsPositionPositioning AttributeProcessProteinsReplicative SenescenceResolutionRete MalpighiiShapesSpeedStratum BasaleStratum GerminativumSurfaceSurvey InstrumentSurveysSystemTestingThree-dimensional analysisTimeTissue GrowthTissuesViscosityadulthoodbody movementcell behaviorcell biologycell cortexcell dimensioncell imagingcell motilitycellular behaviorcellular imagingcomputational analysescomputational analysiscomputational toolboxcomputational toolscomputational toolsetcomputer analysescomputerized toolsconformationconformationalconformational stateconformationallyconformationsdevelopmentaldrivingembryo cellflyfruit flygastrulationimagingimaging capabilitiesin vivointercalationmechanicmechanicalmorphogenetic processnovelontogenyreplicative agingresolutionsspatial and temporalspatial temporalspatiotemporalthree dimensionaltool
Sign up free to applyApply link · pipeline · email alerts
— or —

Get email alerts for similar roles

Weekly digest · no password needed · unsubscribe any time

Full Description

Project Summary
How epithelial sheets remodel themselves to adopt new tissue conformations through changes in neighbor

relationships and cell shape dynamics has been a key question in development and disease. Interestingly,

many of the pioneering studies performed in model systems have largely been confined to 2D analysis, and

have often been challenged to image cell behaviors that occur in basal regions that lie deeper into the tissue.

The intercalation movements that occur during tissue elongation in the Drosophila gastrula have been a classic

system for understanding epithelial remodeling, and have been fundamental to informing the developmental

paradigms that describe how cells can change position in an adherent epithelium. Nearly all of the studies in

this system have been confined to 2D analysis of apical events in the early fly embryo, and no studies to date

have systematically analyzed the full 3D behaviors that drive epithelial remodeling and tissue extension in the

Drosophila embryonic epithelium. Thus, one of the biggest remaining questions in the field is how the

volumetric nature of epithelial cells affects force propagation and remodeling of the cell surface along the entire

apical-basal axis. Fundamental questions on where forces originate from as well as how far and fast forces

propagate across different apical-basal layers have remained unanswered. In our preliminary analysis, we

have been successful in completing the first full 4D segmentation of the intercalating Drosophila epithelium

through the use of Lattice Light Sheet Microscopy (LLSM). We find that intercalation can be initiated at any

position we have surveyed along the apical-basal axis. This is striking as previous studies have largely

implicated apical force generation, and a single study has suggested that contractile forces can also originate

from the basal surface of the epithelium. In the proposed project, we are developing the tools to perform the

first comprehensive, quantitative 3D analysis of cell intercalation in the early Drosophila embryo. We will then

determine the molecular mechanisms driving 3D force generation, and whether different mechanical regimes

exist across the apical-basal axis. Preliminary data suggests highly novel dynamic Myosin II and F-actin

populations that show rapid axial propagation in lateral and basal regions. The 3D distributions of these

populations are being mapped and the relevant actin nucleating and Myosin regulatory networks will be

determined. These results will provide the first comprehensive understanding of the cortical and contractile

networks that determine the mechanical environment of a gastrulating epithelium. We will also use 3D data

sets in wild-type and functionally compromised backgrounds to examine how epithelial forces propagate along

apical-basal and planar dimensions using topological mapping metrics. We will determine how far, and at what

velocities, contractile forces spread in an intact, developing epithelium. These results will give fundamental

answers into how the viscous cytoplasm and elastic cell cortex respond to force-driven displacements, and

how these displacements spread within individual cells and across tissues to drive new tissue topologies.

Grant Number: 5R01GM144506-03
NIH Institute/Center: NIH

Principal Investigator: James Blankenship

Sign up free to get the apply link, save to pipeline, and set email alerts.

Sign up free →

Agency Plan

7-day free trial

Unlock procurement & grants

Upgrade to access active tenders from World Bank, UNDP, ADB and more — with email alerts and pipeline tracking.

$29.99 / month

  • 🔔Email alerts for new matching tenders
  • 🗂️Track tenders in your pipeline
  • 💰Filter by contract value
  • 📥Export results to CSV
  • 📌Save searches with one click
Start 7-day free trial →