grant

Uncovering mechanisms that underpin bat virus virulence

Organization UNIVERSITY OF CALIFORNIA BERKELEYLocation BERKELEY, UNITED STATESPosted 4 Aug 2025Deadline 31 Jul 2027
NIHUS FederalResearch GrantFY2025AccelerationAgingAnti-InflammatoriesAnti-Inflammatory AgentsAnti-inflammatoryAnti-viral ResponseAutomobile DrivingAvesAvianBatsBirdsBody SizeCRISPRCRISPR/Cas systemCase Fatality RatesCell BodyCell Communication and SignalingCell Culture TechniquesCell LineCell SignalingCellLineCellsCellular Immune FunctionChiropteraClustered Regularly Interspaced Short Palindromic RepeatsCoupledDNA Damage RepairDNA RepairDataDiseaseDisorderEbolaEquine MorbillivirusEvolutionExhibitsFibroblastsFiloviridaeFilovirusFrankfurt-Marburg Syndrome VirusGeneralized GrowthGenesGenomeGenus PteropusGrowthHarvestHendra VirusHendra henipavirusHumanIFNIFN-regulatory factor 3IFNAR2IFNAR2 geneIFNARBIRF-1IRF-3 proteinIRF1IRF1 geneIRF3IRF3 geneImmuneImmune responseImmunesImmunityImmunochemical ImmunologicImmunologicImmunologicalImmunologicallyImmunologicsImmunologyIn VitroIncrease lifespanIndianaInfectionInflammationInflammatoryInterferon Regulatory Factor 1Interferon Regulatory Factor 3InterferonsIntracellular Communication and SignalingKnock-outKnockoutLength of LifeLinkLiteratureLocomotionLongevityLyssavirusMERS corona virusMERS coronavirusMERS virusMERS-CoVMammaliaMammalsMarburgMarburg virusMarburg-like VirusesMarburgvirusMediatingMetabolicMetabolic stressMiddle East Respiratory Syndrome Corona VirusMiddle East Respiratory Syndrome CoronavirusMiddle East Respiratory Syndrome VirusMiddle East Respiratory Syndrome-CoVMiddle East Respiratory VirusMiddle East Respiratory coronavirusMiddle Eastern Respiratory Syndrome Corona virusMiddle Eastern Respiratory Syndrome CoronavirusMiddle Eastern Respiratory Syndrome VirusMiddle Eastern Respiratory Syndrome-CoVModern ManMolecularMolecular EvolutionMyD32 proteinNipah VirusNipah henipavirusNon-Polyadenylated RNAOrthomarburgvirusPaperPathologyPathway interactionsPhenotypePhysiologicPhysiologicalPhysiologyPlaque AssayProcessPropertyPteropusPublic HealthRNARNA Gene ProductsRNA SeqRNA sequencingRNAseqRabiesRegulator GenesResearchResidualResidual stateResistanceRibonucleic AcidSARS VirusSARS corona virusSARS coronavirusSARS-Associated CoronavirusSARS-CoVSARS-CoV-1SARS-Related CoronavirusSecondary toSerial PassageSerotypingSevere Acute Respiratory CoronavirusSevere Acute Respiratory Syndrome VirusSevere Acute Respiratory Syndrome corona virusSevere Acute Respiratory Syndrome coronavirusSignal TransductionSignal Transduction SystemsSignalingStrains Cell LinesSystemTestingTheoretic ModelsTheoretical modelTissue GrowthTranscriptional Regulatory ElementsTransmissionUnscheduled DNA SynthesisVSVVariantVariationVesicular Stomatitis VirusVesicular stomatitis Indiana virusViralViral BurdenViral DiseasesViral LoadViral Load resultVirulenceVirulentVirusVirus DiseasesWorkZoonosesZoonoticZoonotic Infectionaging associatedaging preventionaging relatedaging resilienceanti aginganti geronicanti-viral immunityantiagingantiviral immunitybiological signal transductionboost longevityburden of diseaseburden of illnesscell culturecell culturescell resiliencecell resiliencycellular resiliencecellular resiliencycomparativecomputer based predictioncostcultured cell linedisease burdendrivingelongating the lifespanenhance longevityexperienceexperimentexperimental researchexperimental studyexperimentsextend life spanextend lifespanextend longevityfoster longevitygenetic trans acting elementhost responseimmune functionimmune system responseimmunopathologyimmunoresponseimprove lifespanimprove longevityinterferon-stimulated gene factor 1life spanlifespanlifespan extensionlyssaontogenyoxidative damageoxidative injurypathwaypredictive modelingprevent age relatedprevent agingprolong lifespanprolong longevitypromote lifespanpromote longevityrapid growthregulatory generesilienceresilience during agingresilience in agingresilience in normal agingresilience to agingresilience with agingresilientresilient agingresilient to agingresistantresponsesevere acute respiratory syndrome-CoVstressorsupport longevitysuppress agingtheoriestraittrans acting elementtranscriptome sequencingtranscriptomic sequencingtranscriptomicstransmission processviral infectionviral resistancevirus infectionvirus resistancevirus-induced disease
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Full Description

Project Summary
Bats are reservoir hosts for zoonoses that cause the highest case fatality rates documented in humans,

including rabies and related lyssaviruses, Hendra and Nipah henipaviruses, Ebola and Marburg filoviruses, and

SARS and MERS coronaviruses. Bats exhibit limited disease upon infection with these viruses that cause

extreme pathology in other mammals, likely due to robust and rapid innate and cell-mediated immune

defenses, coupled with hyper-efficient mechanisms of DNA damage repair and dampened inflammatory

pathways. Recent theoretical work in our lab demonstrates how these unique features of bat immunology and

physiology—chiefly, constitutive antiviral immunity and resilience to inflammation that confers tolerance to

immunopathology—should select for the evolution of high virus growth rates that, while avirulent to bats, are

likely to cause pathology following spillover to non-bat, including human, hosts. Here, we seek to explicitly test

the predictions of our theoretical model by carrying out experimental evolution of vesicular stomatitis virus

(VSV) in bat cell cultures that span a range of both (Aim 1) constitutive antiviral and (Aim 2) inflammation

tolerant phenotypes. Under Aim 1, we examine variation in VSV growth rate evolution and the rate of molecular

evolution following serial passage of virus across a suite of Pteropus alecto bat cell lines that exhibit both intact

(wildtype) and deficient (CRISPR knock-outs) antiviral immune functions. Under Aim 2, we leverage our lab’s

unique system of primary bat fibroblast cell lines derived from related species spanning a range of longevities

to evaluate whether cells derived from longer-lived species that demonstrate resilience to aging-related

stressors also exhibit heightened tolerance of virus infection. We then compare VSV evolution following serial

passage across cell lines that demonstrate variable resilience to aging-related stressors in vitro. We

hypothesize that antiinflammatory properties in bat cells which confer resilience to aging stressors may also

facilitate virus tolerance by limiting immunopathology and—by extension—drive the evolution of high growth

rate viruses likely to generate pathology in non-bat hosts. Ultimately, we offer an explicit empirical test of the

hypothesized mechanisms underpinning the extreme virulence of bat virus zoonoses.

Grant Number: 1R21AI188400-01A1
NIH Institute/Center: NIH

Principal Investigator: Cara Brook

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