grant

Type 1-2 immune cross-regulation in the lung

Organization UNIVERSITY OF CALIFORNIA, SAN FRANCISCOLocation SAN FRANCISCO, UNITED STATESPosted 13 Sept 2024Deadline 12 Sept 2026
NIHUS FederalResearch GrantFY2025(IFN) α(IFN)-α(IFN)α3-D Imaging3-D modeling3D imaging3D modelingAcuteAlferonAllergicAllergic DiseaseAllergic inflammationAllergyAlveolarAmphiregulinApoptoticAsthmaB Cell Differentiation Factor IB cell growth factor 2B-Cell Growth Factor-IIBCGF-IIBCGF2BacteriaBody TissuesBody WeightBody Weight decreasedBronchial AsthmaCOVID crisisCOVID epidemicCOVID pandemicCOVID-19 crisisCOVID-19 epidemicCOVID-19 eraCOVID-19 global health crisisCOVID-19 global pandemicCOVID-19 health crisisCOVID-19 infectionCOVID-19 pandemicCOVID-19 periodCOVID-19 public health crisisCOVID-19 virus infectionCOVID-19 yearsCOVID19 infectionCRGFCell Communication and SignalingCell DeathCell Death InductionCell SignalingCessation of lifeChronicColorectum Cell-Derived Growth FactorComplexConfocal MicroscopyDataDeathDevelopmentDiseaseDisorderDistalEo-CSFEosinophil Differentiation FactorFibroblastsFoundationsGoalsHelper CellsHelper T-CellsHelper T-LymphocytesHelper-Inducer T-CellsHelper-Inducer T-LymphocyteHumanIFNIFN AlphaIFN αIFN-GammaIFN-gIFN-αIFN-γIFNGIFNaIFNαIFNγIL-13IL-5IL13IgA enhancing factorImmuneImmune InterferonImmune responseImmune systemImmunesImmunityImpairmentIndividualInducer CellsInducer T-LymphocytesInduction of ApoptosisInfectionInflammationInfluenza AInfluenza A virusInfluenza Viruses Type AInfluenzavirus AInterferon Alfa-n3Interferon GammaInterferon Type IIInterferon-αInterferonsInterleukin 5 PrecursorInterleukin-13Interleukin-5Intracellular Communication and SignalingKeratinocyte-Derived Autocrine FactorL monocytogenesL. monocytogenesLeukocyte InterferonListeria monocytogenesLungLung DiseasesLung InflammationLung ParenchymaLung Respiratory SystemLung TissueLung damageLung infectionsLymphatic cellLymphoblast InterferonLymphoblastoid InterferonLymphocyteLymphocyte FunctionLymphocyte SubpopulationsLymphocyte SubsetLymphocyticLymphoid CellMediatingMiceMice MammalsModelingModern ManMorbidityMorbidity - disease rateMurineMusOrthomyxovirus Type AOutcomePatientsPneumonitisPrecision therapeuticsPredispositionProductionProliferatingPulmonary DiseasesPulmonary DisorderPulmonary InflammationRecoveryRegulationRepressionRestRoleSARS-CoV-2 epidemicSARS-CoV-2 global health crisisSARS-CoV-2 global pandemicSARS-CoV-2 infectionSARS-CoV-2 pandemicSARS-CoV2 infectionSARS-coronavirus-2 epidemicSARS-coronavirus-2 pandemicSchwannoma-Derived Growth FactorSevere Acute Respiratory Syndrome CoV 2 epidemicSevere Acute Respiratory Syndrome CoV 2 pandemicSevere acute respiratory syndrome coronavirus 2 epidemicSevere acute respiratory syndrome coronavirus 2 infectionSevere acute respiratory syndrome coronavirus 2 pandemicSeveritiesSignal InductionSignal TransductionSignal Transduction SystemsSignalingSourceStructure of parenchyma of lungSusceptibilityT cell replacing factorT-Cell Replacing FactorTestingThree-Dimensional ImagingTissuesType A InfluenzaViralViral DiseasesViral Respiratory Tract InfectionVirus DiseasesWeight GainWeight IncreaseWeight LossWeight ReductionWorkapoptosis in lymphocytesapoptotic lymphocytesarmasthma attackasthma exacerbationbiological signal transductionbody weight gainbody weight increasebody weight losscolorectal cell-derived growth factorcolorectal-associated growth factorcolorectum-associated growth factorcoronavirus disease 2019 crisiscoronavirus disease 2019 epidemiccoronavirus disease 2019 global health crisiscoronavirus disease 2019 global pandemiccoronavirus disease 2019 health crisiscoronavirus disease 2019 infectioncoronavirus disease 2019 pandemiccoronavirus disease 2019 public health crisiscoronavirus disease crisiscoronavirus disease epidemiccoronavirus disease pandemiccoronavirus disease-19 global pandemiccoronavirus disease-19 pandemiccounterregulationcytokinedesigndesigningdevelopmentaldisease of the lungdisorder of the lungexacerbation in asthmaexacerbation prone asthmaexacerbation prone asthmaticglobal healthhost responseimmune system responseimmunoresponseinfected with COVID-19infected with COVID19infected with SARS-CoV-2infected with SARS-CoV2infected with coronavirus disease 2019infected with severe acute respiratory syndrome coronavirus 2insightkeratinocyte autocrine factorlFN-Gammalung disorderlung functionlung injurylymph celllymphocyte apoptosislymphocyte effector moleculeslymphocyte traffickingmortalitynecrocytosisnovelpathogenprecision therapiesprecision treatmentpulmonarypulmonary damagepulmonary functionpulmonary infectionspulmonary injurypulmonary tissue damagepulmonary tissue injuryrespiratoryresponseseasonal fluseasonal influenzasevere acute respiratory syndrome coronavirus 2 global health crisissevere acute respiratory syndrome coronavirus 2 global pandemicsocial rolespatial RNA sequencingspatial gene expression analysisspatial gene expression profilingspatial resolved transcriptome sequencingspatial transcriptome analysisspatial transcriptome profilingspatial transcriptome sequencingspatial transcriptomicsspatially resolved transcriptomicsspatio transcriptomicsthree-dimensional modelingtissue repairtraffickingviral infectionviral respiratory infectionvirus infectionvirus-induced diseasewt gainwt-loss
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Full Description

Project Summary
Respiratory viral infections are a prevalent and ongoing threat to global health, as evidenced by seasonal

Influenza A infections and the SARS-CoV-2 pandemic. Notably, the association between allergy and asthma

and the severity of respiratory viral illness has been long observed but poorly understood. Group 2 innate

lymphoid cells (ILC2s) and the adaptive counterpart Type 2 CD4 helper cells (Th2) have been extensively

investigated for their role in allergic inflammation. Our group has described the localization of these type 2

lymphocytes (T2L) in non-lymphoid tissues, such as the lung, at rest and under allergic and mixed type 1-2

inflammation, observing localization near large airways and vessels at rest and expansion to the tissue

parenchyma with allergic inflammation. Interestingly, in mixed type 1-2 inflammation, T2L parenchymal

distribution is restricted due to Interferon gamma (IFNγ) signaling on T2L. My preliminary data demonstrates that

IFNγ-mediated restriction also occurs following viral respiratory infection with Influenza A virus (IAV, PR8) and

impacts mouse body weight and lung function. In parallel, I have demonstrated that loss IFNα/β signaling on

T2Ls increases body weight loss and impairs lung function in IAV, potentially through a distinct mechanism.

These data suggest that IFN-mediated restriction of T2L and T2L topography is critical for appropriate viral

clearance and/or tissue repair in viral respiratory infection. Mechanisms of IFN-mediated restriction of T2L have

been explored by many groups, including ours, however how this restriction of topography and counter-regulation

of T1 immunity by T2L dictate the immune response to viral infection remains elusive. I hypothesize that IFN

signaling regulates the topography and function of lung T2Ls in pulmonary viral infections. This proposal will

define the topography of T1-T2 cross-regulation in the setting of pulmonary viral infection (Aim 1) and evaluate

mechanism of interferon mediated restriction of type 2 lymphocytes (Aim 2). Completion of these aims will

elucidate the role of canonical type 1 and type 2 cytokines in mediating tissue resident lymphocyte function in

complex inflammation, providing novel mechanistic insight into how topography dictates immunity. Completion

of this study provides a foundation for the development of precision therapeutics to selectively regulate lung

resident lymphocytes subsets to impact the outcome of diverse lung diseases.

Grant Number: 5F31HL172636-02
NIH Institute/Center: NIH

Principal Investigator: Sofia Caryotakis

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