grant

TRiPOD: Toward Reusable Phenotypes in Observational Data for AD/ADRD - managing definitions and correcting bias

Organization UNIVERSITY OF PENNSYLVANIALocation PHILADELPHIA, UNITED STATESPosted 15 Sept 2021Deadline 31 May 2026
NIHUS FederalResearch GrantFY2025AD dementiaAD related dementiaADRDAI AugmentedAI assistedAI drivenAI enhancedAI integratedAI poweredActive LearningAddressAffectAlgorithmsAlzheimer Type DementiaAlzheimer disease dementiaAlzheimer sclerosisAlzheimer syndromeAlzheimer'sAlzheimer's DiseaseAlzheimer's and related dementiasAlzheimer's dementia and related dementiaAlzheimer's dementia or related dementiaAlzheimer's disease and related dementiaAlzheimer's disease and related disordersAlzheimer's disease or a related dementiaAlzheimer's disease or a related disorderAlzheimer's disease or related dementiaAlzheimer's disease related dementiaAlzheimers DementiaAmericanArtificial Intelligence enhancedAugmented by AIAugmented by the AIAugmented with AIAugmented with the AICausalityCause of DeathClinical ResearchClinical StudyCommunitiesComplexCooperative LearningDataData AnalysesData AnalysisDepositDepositionDiseaseDisorderDrug ExposureElectronic Health RecordEngineeringEpidemiologistEtiologyEvaluationExperiential LearningFAIR dataFAIR guiding principlesFAIR principlesFindable, Accessible, Interoperable and Re-usableFindable, Accessible, Interoperable, and ReusableGoalsHealth CareIncentivesIncidenceInformaticsInvestigationJointsKnowledgeLiteratureLong-Term CareMedicalMethodsModernizationObservation researchObservation studyObservational StudyObservational researchOntologyOutcomePathogenesisPatientsPhenotypePreventionPrimary Senile Degenerative DementiaProbabilistic ModelsProbabilityProbability ModelsProtocolProtocols documentationPublication BiasReproducibilityResearchRisk FactorsSamplingSourceStandardizationStatistical ModelsTerminologyTranslational ResearchTranslational Scienceartificial intelligence assistedartificial intelligence augmentedartificial intelligence drivenartificial intelligence integratedartificial intelligence poweredbasebasescare servicescare systemscausationcohortcommunity engagementdata interpretationdata managementdepositorydisease causationeffective therapyeffective treatmentelectronic health care recordelectronic health medical recordelectronic health plan recordelectronic health registryelectronic medical health recordengagement with communitiesenhanced with AIenhanced with Artificial Intelligenceextended carehospital servicesimprovedinsightinternet portalmedical claimsnovelon-line portalonline portalpaymentphenotypic dataphenotyping algorithmpreventpreventingprimary degenerative dementiarepositoryresponse to therapyresponse to treatmentrisk stratificationsenile dementia of the Alzheimer typesocialstatistical linear mixed modelsstatistical linear modelsstratify risktherapeutic responsetherapy responsetooltraittranslation researchtranslational investigationtreatment responsetreatment responsivenessweb portalweb-based portal
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Full Description

Project Summary
Large observational data such as electronic health records (EHRs) and medical claims have

become an enabling source for facilitating clinical and translational research including Alzheimer's

Disease and Alzheimer's Disease Related Dementia (AD/ADRD). One major challenge for

conducting observational AD/ADRD studies is about phenotyping – there is a lack of a centralized

repository for hosting and standardizing phenotype definitions in AD/ADRD research and few

methods have been developed to address bias associated with phenotyping errors in observation

data. Therefore, the overarching goal of this proposal is to fully develop a joint effort between

medical informaticians, statisticians, clinicians, and epidemiologists with a focus on building a

rigorous set of methods and tools for managing phenotype definitions and for correcting bias in

observational data analysis, through modern knowledge engineering and data-driven statistical

modeling. To achieve that goal, we propose three specific aims in this study: (1) Aim 1 - Collect,

normalize, and share definitions of common phenotypes used in AD/ADRD observational

research; (2) Aim 2 - Develop novel algorithms to correct bias associated with phenotyping errors

when users apply existing phenotype definitions to local data; and (3) Aim 3 - Validate, refine, and

disseminate proposed methods and tools by demonstration studies and community engagement.

We believe informatics methods and tools proposed here will improve current practice on

phenotypic data management and analysis, thus enhancing the reproducibility and quality of

observational studies on AD/ADRD.

Grant Number: 5R01AG073435-05
NIH Institute/Center: NIH

Principal Investigator: Yong Chen

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