grant

TRIM37 is a genetic determinant of racial disparity in metastatic TNBC patients

Organization UNIVERSITY OF CALIFORNIA AT DAVISLocation DAVIS, UNITED STATESPosted 1 Apr 2021Deadline 31 Mar 2027
NIHUS FederalResearch GrantFY2025AddressAdult Folate Receptor 1Adult Folate-Binding ProteinAffectAfrican AmericanAfrican American FemalesAfrican American WomenAfro AmericanAfroamericanAllelesAllelomorphsAnoikisAntibodiesAntisense AgentAntisense OligonucleotidesArtificial nano particlesArtificial nanoparticlesBiologicalBody TissuesBrainBrain Nervous SystemBreastBreast CancerBreast Cancer CellBreast Cancer PatientBreast Cancer Risk FactorBreast Cancer TreatmentBreast Cancer cell lineBreast Epithelial CellsBreast MetastasisBreast TissueBreast Tumor PatientBreast tumor cell lineCRISPR editing screenCRISPR screenCRISPR-based screenCRISPR/Cas9 screenCaucasianCaucasian RaceCaucasiansCaucasoidCaucasoid RaceCell LineCellLineCirculationClinicalDataData SetDeath RateDecrease disparityDependenceDevelopmentDiseaseDisorderDisparitiesDisparityDistantEarly-Stage Clinical TrialsEncephalonEngineeringEpigeneticEpigenetic ChangeEpigenetic MechanismEpigenetic ProcessEthnic OriginEthnicityExpression SignatureFOLRFOLR1FOLR1 geneFolate Receptor AlphaFunctional dependenceGene Expression ProfileGene TranscriptionGene variantGeneralized GrowthGenesGeneticGenetic DeterminismGenetic PolymorphismGenetic RiskGenetic TranscriptionGenomeGenotypeGoalsGrowthHead StartHead Start ProgramIn VitroIncidenceInfiltrationLegal patentLinkLiverLower disparityMOv18Malignant Breast NeoplasmMalignant CellMammary Gland ParenchymaMammary Gland TissueMetastasisMetastasis to the LungMetastasizeMetastatic LesionMetastatic MassMetastatic NeoplasmMetastatic Neoplasm to the LungMetastatic TumorMetastatic Tumor to the LungMetastatic breast cancerMolecular TargetNeoplasm MetastasisOccidentalOncogene ProductsOncogene ProteinsOncogenicOncoproteinsOutcomeOvarian Cancer-Associated AntigenPDX modelPatentsPathway interactionsPatient derived xenograftPatientsPhase 1 Clinical TrialsPhase I Clinical TrialsPhenotypePredispositionPredisposition genePrognosisPrognostic MarkerProteinsQTLQuantitative Trait LociRBCC/TRIM MotifRNA ExpressionRaceRacesRacial SegregationRelapseResistanceRiskSecondary NeoplasmSecondary TumorSingle Base PolymorphismSingle Nucleotide PolymorphismSiteStrains Cell LinesSurvival RateSusceptibilitySusceptibility GeneTNBCTRIM MotifTechnologyTestingTherapeuticTherapeutic InterventionTissue GrowthTissuesTranscriptionTripartite MotifTumor BurdenTumor LoadTumor TissueVariantVariationaccess to health careaccessibility of health careaccessibility to health careallelic variantantisense oligobiologicbreast cancer metastasisbreast cancer riskbreast tumor cellcancer cellcancer disparitycancer health disparitycancer metastasiscancer predispositioncancer sub-typescancer subtypescancer-related health disparitycausal allelecausal genecausal mutationcausal variantcausative mutationcausative variantclinical relevanceclinically relevantclustered regularly interspaced short palindromic repeats screenco-morbidco-morbiditycomorbiditycultured cell linedetermine efficacydevelopmentaldisparities in racedisparities in treatmentdisparity due to racedisparity in cancerdisparity in caredisparity in health caredisparity reductionefficacy analysisefficacy assessmentefficacy determinationefficacy evaluationefficacy examinationengineered nano particleengineered nanoparticleepigeneticallyethnic diversityethnically diverseevaluate efficacyexamine efficacyexperiencefolate carrierfolate receptorfolate-binding proteinfolate-methotrexate transporterfolic acid binding proteinfolic acid receptorgene expression patterngene expression signaturegenetic determinantgenetic variantgenomic varianthealth care accesshealth care availabilityhealth care disparityhealth care inequalityhealth care inequityhealth care service accesshealth care service availabilityhepatic body systemhepatic organ systemhigh riskin vivoin vivo Modelindividuals with breast cancerinequality due to raceinequality in treatmentinequity due to raceinnovateinnovationinnovativeintervention therapylung metastasismalignant breast tumormammary epithelial cellsmammary gland epithelial cellsmetastasize to the lungmetastatic breast tumormetastatic mammary cancermetastatic mammary tumormethotrexate-binding proteinmitigate disparitymortality ratemortality ratiomouse modelmurine modelnano particlenano-sized particlenanoparticlenanosized particlenovelontogenyoverexpressoverexpressionpathwaypatient derived xenograft modelpatients with breast cancerperson with breast cancerphase I protocolpolymorphismpredisposing geneprognostic biomarkerprognostic indicatorprogramsprospectivepulmonary metastasisrace based disparityrace based inequalityrace based inequityrace disparityrace related disparityrace related inequalityrace related inequityracialracial backgroundracial disparityracial inequalityracial inequityracial originracially unequalrational designreduce disparityreduction in disparityresistantsingle nucleotide variantsurvival outcomesusceptibility allelesusceptibility locussusceptibility varianttargeted drug therapytargeted drug treatmentstargeted therapeutictargeted therapeutic agentstargeted therapytargeted treatmenttranscriptional profiletranscriptional signaturetranscriptomicstreatment disparitytreatment inequalitytreatment inequitytriple-negative breast cancertriple-negative invasive breast carcinomatumortumor cell metastasistumor growthwhite race
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Full Description

African American (AA) women presents with aggressive metastatic subtype of triple negative breast cancer
(TNBC) compared to other ethnicities and experience greater mortality rates. Although health care disparities

contribute to poor prognosis in AA women but a race-specific genetic component to TNBC disparity cannot be

ruled out. Thus, racially-segregated genetic determinant underlying TNBC disparity remains an unmet clinical

need. This project is built upon our novel findings suggesting that an oncogenic tripartite motif-containing

protein 37 (TRIM37) protein predisposes AA women to highly aggressive TNBC. We demonstrate that 1)

TRIM37 associates with metastatic phenotype and overall survival in TNBC patients, 2) TRIM37 is expressed

at higher level in the breast and TNBC tumor tissue of AA women relative to other races, 3) TRIM37-

associated single nucleotide polymorphism correlates with high TRIM37 expression in AA women, 4) TRIM37

regulates genes and pathways involved in metastasis cascade, such as promoting survival in circulation, 5) AA

TNBC cells showed increased dependency on oncogenic TRIM37 compared to non-AA TNBC cell lines in vitro

and in vivo, 6) TRIM37 depletion reduces distant infiltration and growth in metastasis murine model 7) TRIM37

inhibition using targeted nanoparticles-based delivery of TRIM37-specific antisense oligonucleotides reduces

TNBC tumor growth. Based on these findings, we hypothesize that higher TRIM37 levels in AA women gives a

would-be cancer cell a “head start” by creating a pre-metastatic niche. This hypothesis will be tested in three

specific aims. In aim 1, we will evaluate TRIM37-allelic variants, that we have already identified, through small-

scale phenotypic screen based on anoikis resistance. We will also determine the mechanism of TRIM37-allelic

variants by comparing the biological activity of TRIM37 risk and reference alleles. In aim 2, we will compare

and contrast the relative contribution of TRIM37 to TNBC metastatic potential in race-dependent manner. We

will also track association between TRIM37 and its transcriptional signatures with race, metastasis incidence,

and patient's survival using disease-free and tumor tissue from TNBC patients. In aim 3, we will compare the

metastatic potential of TRIM37-depleted and TRIM37 overexpressing race-specific breast and TNBC cells

using spontaneous metastasis murine models. Finally, we will test newly engineered TNBC selective

therapeutic platform to inhibit TRIM37 using spontaneous metastasis, race-specific patient-derived xenografts

and humanized murine models. Together, the proposed studies will demonstrate that TRIM37 is a genetic

variant associated with high TNBC risk in AA women and proof-of-concept results will establish the clinical

relevance of inhibiting TRIM37 for TNBC treatment.

Grant Number: 5R01CA248930-06
NIH Institute/Center: NIH

Principal Investigator: Sanchita Bhatnagar

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