grant

Transcriptional regulation of mammary gland development

Organization MICHIGAN STATE UNIVERSITYLocation EAST LANSING, UNITED STATESPosted 1 Jul 2022Deadline 31 Mar 2027
NIHUS FederalResearch GrantFY202521+ years oldAblationAbscissionAddressAdultAdult HumanAlveolarBiologyBody TissuesBreast CancerBreast Epithelial CellsCRISPRCRISPR/Cas systemCancersCell BodyCell CycleCell Cycle ControlCell Cycle RegulationCell Division CycleCellsChIP SequencingChIP-seqChIPseqClustered Regularly Interspaced Short Palindromic RepeatsColorDataData BasesData SetDatabasesDefectDevelopmentDevelopmental GeneDuctDuct (organ) structureE2F Transcription Factor 1E2F transcription factor 1 proteinE2F transcription factorsE2F-1E2F-1 proteinE2F1E2F1 geneE2F1 proteinEmbryoEmbryonicEnsureExcisionExtirpationGene Down-RegulationGene ExpressionGene TranscriptionGeneralized GrowthGenesGeneticGenetic TranscriptionGestationGlandGoalsGrowthGrowth and DevelopmentGrowth and Development functionHydrocephalusHydrocephalyImageIn VitroIn vivo analysisKO miceKnock-outKnock-out MiceKnockoutKnockout MiceLaboratoriesLactationMalignant Breast NeoplasmMalignant NeoplasmsMalignant TumorMammary glandMediatingMiceMice MammalsMissionMurineMusNational Institutes of HealthNull MouseOutcomePBR3PRB-Binding Protein E2F-1Pathway interactionsPatternPhasePhenotypePlayPregnancyProcessPubertyPublic HealthPublishingRBAP-1RBBP-3RBBP3RBP3RNA ExpressionRegulationRemovalReporterRepressionResearchRetinoblastoma Binding Protein 3Retinoblastoma-Associated Protein 1RoleSignal PathwaySortingSurgical RemovalTamoxifenTestingTissue GrowthTissuesTranscriptionTranscription ActivatorTranscription CoactivatorTranscription Factor CoactivatorTranscription RepressionTranscription RepressorTranscriptional Activator/CoactivatorTranscriptional ControlTranscriptional RegulationTranscriptional RepressorUnited States National Institutes of HealthValidationWeaningWorkadulthoodbreast epitheliumcell typechromatin immunoprecipitation coupled with sequencingchromatin immunoprecipitation followed by sequencingchromatin immunoprecipitation with sequencingchromatin immunoprecipitation-seqchromatin immunoprecipitation-sequencingconditional knock-outconditional knockoutdata basedevelopmentalgene repressiongenetic repressorhydrocephalicimagingin vivo evaluationin vivo testinginduced Creinducible Creinnovateinnovationinnovativelactatinglactationalmalignancymalignant breast tumormammarymammary epithelial cellsmammary epitheliummammary gland developmentmammary gland epithelial cellsmammary gland morphogenesismammary morphogenesisneoplasm/canceroffspringontogenypathwayprogramsreconstitutereconstitutionresectionscRNA sequencingscRNA-seqsingle cell RNA-seqsingle cell RNAseqsingle cell analysissingle cell expression profilingsingle cell genomicssingle cell transcriptomic profilingsingle-cell RNA sequencingsocial roletranscription factor E2F1validations
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Full Description

Mammary gland development and function requires precise stage and spatial control of
transcriptional programs. These processes are tightly controlled to ensure the successful function

of the mammary gland, including lactation which is essential for rearing of offspring. Recent work

has demonstrated a role for the E2F transcription factors that goes well beyond their traditional

role in cell cycle regulation. The role of the activator E2Fs (E2F1-3a) is well characterized,

including regulation of mammary gland development. However, little is known of the role of the

repressor E2Fs, E2F4 and E2F5, in the mammary gland and this is partially due to hydrocephaly

and early lethality in the knockout strains. The long term goal of our work is to define the role of

transcriptional regulation in mammary gland development and function. Understanding normal

biology then informs our studies of how this goes awry and results in breast cancer. The

immediate objective of this proposal, which is the next step in our long-term goal, is to precisely

define the role of repressor E2Fs in the mammary gland. Our central hypothesis is that the

repressor E2Fs regulate key mammary gland developmental genes. This hypothesis was based

on preliminary data from knockout mice. Indeed, loss of E2F5 in the mammary epithelium resulted

in delayed ductal extension during puberty, delayed involution and alveolar overgrowth in virgin

adult mice. Loss of E2F4 also resulted in delayed ductal outgrowth but was also associated with

a profound lack of alveolar expansion during pregnancy and lactation. Combining ChIP-Seq data

and our gene expression data, we predicted both unique and shared E2F target genes with

mammary development roles. The rationale for the proposed work is that once we have

completed this proposal, we will understand how transcriptional repression regulates

development of the mammary gland. We plan to test our central hypothesis and accomplish the

objective of this application by investigating the following specific aims. In the first aim we will

characterize the mammary gland phenotypes associated with the mammary epithelial cell specific

knockout of E2F5. In the second aim we will generate ChIP-Seq data and integrate it with E2F5

induced gene expression data to determine E2F5 targets. Target genes will be filtered and

prioritized using additional datasets describing mammary development. Finally, in the third aim

we will examine scRNAseq data in virgin glands lacking E2F3 or E2F5. This proposal is innovative

because it will elucidate the genetic mechanisms regulating mammary gland development and

function by the repressor E2F transcription factors. This contribution is significant because it will

establish a role for E2F5 in mammary gland development.

Grant Number: 5R01HD104606-04
NIH Institute/Center: NIH

Principal Investigator: Eran Andrechek

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