grant

The Role of Guanine Exchange Factors in Pancreatic Ductal Adenocarcinoma (PDAC)

Organization WAYNE STATE UNIVERSITYLocation DETROIT, UNITED STATESPosted 1 Sept 2024Deadline 31 Aug 2026
NIHUS FederalResearch GrantFY2025AffectAlternate SplicingAlternative RNA SplicingAlternative SplicingAmino AcidsAnimal ModelAnimal Models and Related StudiesAttenuatedAutomobile DrivingBindingBioinformaticsBiological MarkersBiologyBody TissuesCRISPR approachCRISPR based approachCRISPR methodCRISPR methodologyCRISPR techniqueCRISPR technologyCRISPR toolsCRISPR-CAS-9CRISPR-based methodCRISPR-based techniqueCRISPR-based technologyCRISPR-based toolCRISPR/CAS approachCRISPR/Cas methodCRISPR/Cas technologyCRISPR/Cas9CRISPR/Cas9 technologyCancer CauseCancer EtiologyCancer ModelCancerModelCancersCas nuclease technologyCell BodyCell Communication and SignalingCell Growth in NumberCell MultiplicationCell NucleusCell Nucleus Active TransportCell ProliferationCell SignalingCellsCellular ExpansionCellular GrowthCellular ProliferationCessation of lifeChromatinChromosome CondensationClustered Regularly Interspaced Short Palindromic Repeats approachClustered Regularly Interspaced Short Palindromic Repeats methodClustered Regularly Interspaced Short Palindromic Repeats methodologyClustered Regularly Interspaced Short Palindromic Repeats techniqueClustered Regularly Interspaced Short Palindromic Repeats technologyComplexConfocal MicroscopyCytoplasmCytosolDNA Damage RepairDNA RepairDataDeathDevelopmentDiagnosisDiseaseDisease ProgressionDisorderDisseminated Malignant NeoplasmEventFatty Acid Metabolism PathwayGDP Dissociation FactorGDP Dissociation StimulatorsGDP Exchange FactorsGDP-GTP Exchange ProteinGDP-GTP Reversing FactorsGEM modelGEMM modelGTP BindingGTP GDP exchange factorGTP PhosphohydrolasesGTP boundGTPasesGene TranscriptionGeneralized GrowthGeneticGenetic TranscriptionGenetically Engineered MouseGoalsGrowthGuanineGuanine Nucleotide Exchange FactorsGuanine Nucleotide Exchange ProteinGuanine Nucleotide Releasing FactorsGuanosine Triphosphate PhosphohydrolasesGuanosinetriphosphatasesGuanyl-Nucleotide Exchange FactorGuanyl-Nucleotide Releasing FactorImageImpairmentIntermediary MetabolismIntracellular Communication and SignalingKPC genetically-engineered mouseKPC modelKPC mouseKPC murineKnock-outKnockoutLSL-KrasG12D/+;LSL-Trp53R172H/+;Pdx-1-CreLSL-KrasG12D/+;LSL-p53R172H/+;Pdx-1-CreMaintenanceMalignant CellMalignant NeoplasmsMalignant Pancreatic NeoplasmMalignant TumorMalignant neoplasm of pancreasMapsMediatingMessenger RNAMetabolicMetabolic PathwayMetabolic ProcessesMetabolismMetastasisMetastasizeMetastatic CancerMetastatic LesionMetastatic Malignant NeoplasmMetastatic MassMetastatic NeoplasmMetastatic TumorMethodologyMiceMice MammalsMicroscopyModelingMolecularMolecular InteractionMolecular TransportMurineMusNeoplasm MetastasisNewly DiagnosedNon-Polyadenylated RNANuclearNuclear TransportNucleocytoplasmic ShuttlingNucleusOperative ProceduresOperative Surgical ProceduresOrganPDA modelPDAC ModelPDAC cancer cellPDAC cellPancreas CancerPancreas Ductal AdenocarcinomaPancreatic CancerPancreatic Ductal AdenocarcinomaPathway interactionsPatient outcomePatient-Centered OutcomesPatient-Focused OutcomesPatientsPhasePostdocPostdoctoral FellowProcessPrognosisProliferatingProteinsProteomeProteomicsR-Series Research ProjectsR01 MechanismR01 ProgramRNARNA ExpressionRNA Gene ProductsRNA ProcessingRNA SeqRNA SplicingRNA TransportRNA sequencingRNAseqRegulationResearchResearch AssociateResearch GrantsResearch Project GrantsResearch ProjectsRibonucleic AcidRibonucleic Acid TransportRoleRunningScienceSecondary NeoplasmSecondary TumorSignal TransductionSignal Transduction SystemsSignalingSignaling MoleculeSplicingStaining methodStainsSurgicalSurgical InterventionsSurgical ProcedureTestingTissue GrowthTissuesTrainingTranscriptionTransport ProcessTumor CellTumor-DerivedUnited StatesUnscheduled DNA SynthesisValidationVisualizationadvanced diseaseadvanced illnessaminoacidanti-cancer researchattenuateattenuatesbio-markersbiologic markerbiological signal transductionbiomarkercancer cellcancer metastasiscancer microenvironmentcancer progressioncancer researchcancer typecell growthdevelopmentaldifferential expressiondifferentially expresseddrivingexchange factorfatty acid metabolismgenetically engineered mouse modelgenetically engineered murine modelglobal gene expressionglobal transcription profileguanosinetriphosphataseimagingimprovedinsightknock-downknockdownmRNAmalignancymetabolism measurementmetabolomicsmetabonomicsmodel of animalmouse modelmurine modelneoplasm progressionneoplasm/cancerneoplastic cellneoplastic progressionnew drug targetnew druggable targetnew pharmacotherapy targetnew therapeutic targetnew therapy targetnovelnovel drug targetnovel druggable targetnovel pharmacotherapy targetnovel therapeutic targetnovel therapy targetnucleocytoplasmic transportontogenyoverexpressoverexpressionpancreatic ductal adenocarcinoma cellpancreatic ductal adenocarcinoma modelpancreatic malignancypathwaypatient oriented outcomespatient prognosispost-docpost-doctoralpost-doctoral traineeresearch associatesscRNA sequencingscRNA-seqsingle cell RNA-seqsingle cell RNAseqsingle cell expression profilingsingle cell transcriptomic profilingsingle-cell RNA sequencingsocial rolespatial multiomicsspatial omicsspatial tri-omicssurgerytargeted drug therapytargeted drug treatmentstargeted therapeutictargeted therapeutic agentstargeted therapytargeted treatmenttherapeutic agent developmenttherapeutic developmenttherapeutic targettraffickingtranscriptional differencestranscriptometranscriptome sequencingtranscriptomic sequencingtranscriptomicstreatment and outcometumortumor cell metastasistumor growthtumor microenvironmenttumor progressionvalidations
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Full Description

Project Summary
Pancreatic ductal adenocarcinoma (PDAC) is a cancer with a poor prognosis and limited treatment options.

Multiple lines of evidence have shown that cancer cells frequently become addicted to active nuclear cytoplasmic

transport to sustain their activities including growth and metastasis. A RAN gradient, with high nuclear RAN-GTP

concentration, is required for proper shuttling between the nucleus and the cytoplasm. The RAN guanine

exchange factor, known as regulator of chromosome condensation 1 (RCC1), activates RAN and maintains and

catalyzes RAN-GTP formation in the nucleus. The role of this axis in PDAC is not fully understood. Our

preliminary data show that high RCC1 is correlated with poor patient prognosis. Our studies demonstrate that

Rcc1 depletion in murine PDAC cells alters the steady state distribution of Ran, resulting in widespread

alterations in the subcellular proteome. We found that several cellular pathways are impacted by Rcc1 depletion,

including amino acid and fatty acid metabolism, as well as RNA processing. Based on these findings, we

hypothesize that RCC1 is crucial for PDAC maintenance, and its overexpression may play a role in tumor

progression. Therefore, in the F99 phase, I propose to investigate the role and mechanisms by which RCC1

alters PDAC metabolic activity to drive progression using state-of-the-art transcriptomics and metabolomics

approaches. I will also delineate the role of the RAN-RCC1 axis in the regulation of mRNA processing and

alternative splicing using several imaging and molecular studies. Finally, I will use the well-studied KPC mouse

model of PDAC, crossed with a conditional RCC1 overexpression model, to determine the role of RCC1

overexpression in PDAC development and progression. Most patients with PDAC will die due to metastatic

disease. In the K00 phase, I will focus on studying the metastatic PDAC process. I will investigate the complex

mechanisms of crosstalk between tumor cells and metastasis target organ microenvironment. I aim to determine

how the RAN-RCC1 axis is implicated in driving metastatic progression using animal models and patient tissues.

Results from these studies aim to improve our understanding of the mechanisms that drive PDAC progression.

Our studies will potentially identify potential new vulnerabilities and therapeutic targets with the ultimate goal of

improving treatments and outcomes for patients suffering from this aggressive disease.

Grant Number: 5F99CA294132-02
NIH Institute/Center: NIH

Principal Investigator: Sahar Bannoura

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