grant

The Clinical Biospecimen and Research Core

Organization COLUMBIA UNIVERSITY HEALTH SCIENCESLocation NEW YORK, UNITED STATESPosted 30 Apr 2022Deadline 31 Mar 2027
NIHUS FederalResearch GrantFY2025AgreementAreaAutoregulationBasic ResearchBasic ScienceBioinformaticsBiometricsBiometryBiostatisticsBody TissuesCancer CenterCell BodyCell Culture TechniquesCell NucleusCellsClinicalClinical DataClinical InvestigatorClinical ResearchClinical StudyClinical effectivenessCollaborationsCollectionConsultationsDataData BasesData ElementDatabasesDigestive DiseasesDigestive System DiseasesDigestive System DisordersDiseaseDisorderEducationEducational aspectsEducational workshopElectronic Health RecordEnsureEpithelial CellsFeedbackFertilizationFreezingFundingGI tract disorderGoalsHepatic DisorderHomeostasisHumanHuman Subject ResearchImageImmune MonitoringImmunologic MonitoringImmunological MonitoringImmunomonitoringInfrastructureInstitutionInterdisciplinary ResearchInterdisciplinary StudyInvestigatorsLeadershipLinkLiver diseasesMissionModelingModern ManMultidisciplinary CollaborationMultidisciplinary ResearchNational Institutes of HealthNon-Polyadenylated RNANucleusOrganOrganizational EfficiencyOrganoidsPatient SelectionPatientsPhysiological HomeostasisQualifyingQuality ControlRNARNA Gene ProductsRecordsResearchResearch DesignResearch PersonnelResearch ResourcesResearch SpecimenResearch SupportResearch TrainingResearchersResourcesRibonucleic AcidSamplingScienceScientistServicesSingle-Nucleus SequencingSpecimenStructureStudy TypeSurvey InstrumentSurveysTissue ArraysTissue ChipTissue MicroarrayTissuesTrainingTranslational ResearchTranslational ScienceUnited States National Institutes of HealthUniversitiesWorkWorkshopbio-imagingbiobankbioimagingbiorepositorycell culturecell culturesconferenceconsultationconventioncost effectivedata basedata integrationdata managementdepositorydigestive disorderdigestive tract diseaseelectronic health care recordelectronic health medical recordelectronic health plan recordelectronic health registryelectronic medical health recordempowermentfertilizationsgastrointestinal tract diseasegastrointestinal tract disorderhepatic diseasehepatopathyhistopathologic examinationhistopathological examinationhuman subjectimaginginnovateinnovationinnovativeinterestlife spanlifespanliver disordermeetingmeetingsmembernext generationnoveloperationoperationspatient populationpreventpreventingprogramsrepositorysNuc-Seqsingle cell analysissingle nucleus RNA-sequencingsingle nucleus seqsingle-nucleus RNA-seqsnRNA sequencingsnRNA-seqstudy designsummitsymposiasymposiumtranslation researchtranslational investigationtranslational study
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Full Description

PROJECT SUMMARY
The overall goal of the Clinical Biospecimen and Research Core (CBRC) is to facilitate the conduct of clinical

and translational studies in the Columbia University Digestive and Liver Disease Research Center (CU-DLDRC).

The CBRC will provide research navigation services to its members to access extensive collections and storage

of digestive organ biospecimens. This resource will also combine biospecimen collection and analysis with

comprehensive clinical data elements. In concert with other CU-DLDRC Biomedical Cores, CBRC will enable

state-of-the-art single cell, imaging and organoid modelling-based analyses of its biospecimens through multi-

core workflows, thereby linking to the central theme “Epithelial Cells and Their Interactions in Digestive

Homeostasis and Disease” in human relevant settings. Through collaborative agreements with established

structures in the Cancer Center and Human Immune Monitoring cores, we will offer subsidized services such as

single nucleus RNA-sequencing, tissue microarrays, expert histopathological examination and biostatistical

support, thereby enhancing the capability of the CU-DLDRC to conduct impactful translational research.

Collaborative translational research and cross-fertilization between clinical and basic investigators in the CU-

DLDRC will be fertilized through a central infrastructure and consultative services for clinical research design

and application under the umbrella of organ-specific clinical-basic teams. The organ-specific clinical-basic teams

will support the analysis of CBRC-provided biospecimens in the CU-DLDRC biomedical cores through combined

clinical and basic expertise and dialogue, and vice versa, will bring novel basic research concepts from bench to

beside. The CBRC will led by two highly qualified NIH-funded clinical investigators, Dr. Julian Abrams (Director)

and Dr. Elizabeth Verna (Associate Director). The following Specific Aims will maximize benefits and added value

to CU-DLDRC members and contribute to the mission of the CU-DLDRC: To provide comprehensive biobanking

of digestive organ biospecimens with linked clinical data (Aim 1); to enable state-of-the-art translational analyses

of clinical samples (Aim 2); and to provide tailored human subjects research training, education, and biostatistical

support (Aim 3). According to user surveys, 96% of CU-DLDRC researchers plan to utilize CBRC services. In

conclusion, the CBRC will provide a crucial interface between clinical and basic CU-DLDRC investigators that

does not exist in this form at Columbia and promote high quality collaborative translational research through

access to a wealth of biospecimens. Through these services, the CBRC will provide major benefits to basic and

clinical CU-DLDRC researchers alike.

Grant Number: 5P30DK132710-04
NIH Institute/Center: NIH

Principal Investigator: Julian Abrams

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