grant

Targeting SUMO1 degradation for advanced colon cancer therapy

Organization INDIANA UNIVERSITY INDIANAPOLISLocation INDIANAPOLIS, UNITED STATESPosted 1 Jul 2022Deadline 30 Jun 2027
NIHUS FederalResearch GrantFY20253-D3-Dimensional3DAPF-1ATP-Dependent Proteolysis Factor 1AffinityAnti-Cancer AgentsAntiheparin FactorAntineoplastic AgentsAntineoplastic DrugsAntineoplasticsB-raf-1BRAFBRAF geneBasal Transcription FactorBasal transcription factor genesBasic Mechanisms of SUMOylationBeta Cadherin-Associated ProteinBeta-1 CateninBindingBinding ProteinsBiological MarkersBlood PlasmaBlood Platelet Factor IVBlood platelet factor 4C-K-RASCRISPR approachCRISPR based approachCRISPR editing screenCRISPR methodCRISPR methodologyCRISPR screenCRISPR techniqueCRISPR technologyCRISPR toolsCRISPR-CAS-9CRISPR-based methodCRISPR-based screenCRISPR-based techniqueCRISPR-based technologyCRISPR-based toolCRISPR/CAS approachCRISPR/Cas methodCRISPR/Cas technologyCRISPR/Cas9CRISPR/Cas9 screenCRISPR/Cas9 technologyCUL-2CUL1CUL1 geneCancer DrugCancer ModelCancerModelCas nuclease technologyCessation of lifeChemicalsChemokine (C-X-C motif) Ligand 4Clinical TreatmentClustered Regularly Interspaced Short Palindromic Repeats approachClustered Regularly Interspaced Short Palindromic Repeats methodClustered Regularly Interspaced Short Palindromic Repeats methodologyClustered Regularly Interspaced Short Palindromic Repeats techniqueClustered Regularly Interspaced Short Palindromic Repeats technologyColon CancerColon CarcinomaComplexCullin 1CytoplasmDNA mutationDataDeathDevelopmentDiagnosisDoseDrug ScreeningDrug TargetingDrug TherapyDrugsE3 LigaseE3 Ubiquitin LigaseEC 1.1.1.49Enzyme GeneEnzymesEventFactor 4FoundationsGene TranscriptionGeneral Transcription Factor GeneGeneral Transcription FactorsGenesGenetic ChangeGenetic TranscriptionGenetic defectGenetic mutationGenomicsGlucose-6-Phosphate DehydrogenaseGlucosephosphate DehydrogenaseGlycolysisGoalsHMG-20Heparin Neutralizing ProteinHepatic Neoplasm SecondaryHepatic metastasisHigh Mobility Protein 20HumanIn vivo analysisInterferometryInvadedInvestigationK-RAS2AK-RAS2BK-RasK-Ras 2AK-Ras-2 OncogeneKRASKRAS2KRAS2 geneKi-RASLeadLigand Binding ProteinLigand Binding Protein GeneLigaseLigase GeneLipidsLiquid ChromatographyLiver secondariesLiver secondary cancerMalignant CellMediatingMedicationMetabolicMetastatic Neoplasm to the LiverMetastatic Tumor to the LiverMetastatic malignant neoplasm to liverMiceMice MammalsModern ManModificationMolecularMolecular InteractionMurineMusMutationNOAELNeoplastic Disease Chemotherapeutic AgentsNo-Observed-Adverse-Effect LevelNuclear Magnetic ResonanceOncogene K-RasOrganOrganoidsPDX modelPF4 GenePRO2286Pathway interactionsPatient derived xenograftPatientsPb elementPeptide DomainPharmaceutical PreparationsPharmacological TreatmentPharmacotherapyPlasmaPlasma SerumPlatelet Factor 4ProliferatingProtein BindingProtein DomainsProteinsRAFB1RASK2RNA ExpressionRecombinant Platelet Factor 4RecombinantsResistanceReticuloendothelial System, Serum, PlasmaSCYB4SUMOylationSmall Inducible Cytokine B4Small Inducible Cytokine Subfamily B, Member 4SolidSumoylation PathwaySynthetasesT cell factor 4T cell transcription factor 4T-Cell-Specific Transcription Factor 4TCF-4TCF4TCF7L2TCF7L2 geneTcf4 transcription factorTcf712 transcription factorTertiary Protein StructureTestingToxic effectToxicitiesToxicologyTranscriptionTranscription Factor 7-Like 2Transcription Factor Proto-OncogeneTranscription factor genesTreatment EfficacyTumor BurdenTumor LoadTumor-Specific Treatment AgentsUbiquitilationUbiquitinUbiquitin Ligase Component GeneUbiquitin Ligase GeneUbiquitin Protein LigaseUbiquitin-Protein Ligase ComplexesUbiquitin-Protein Ligase E3UbiquitinationUbiquitinoylationanti-cancer druganticancer activitybeta catbeta cateninbio-markersbiologic markerbiomarkerbound proteincancer cellcancer in the colonchemotherapyclinical interventionclinical therapyclustered regularly interspaced short palindromic repeats screencolon cancer cell linecolon cancer patientscolon cancer therapycolon cancer treatmentcolorectal cancer cell linecolorectal cancer patientsdevelopmentaldrug actiondrug interventiondrug treatmentdrug/agenteffective therapyeffective treatmentefficacious therapyefficacious treatmentgamma-Thromboglobulingenome mutationgenome scalegenome wide screengenome-widegenomewideheavy metal Pbheavy metal leadhuman diseasein vivo evaluationin vivo testingintervention efficacyliver metastasesmalignant liver neoplasm, specified as secondarymetabolism measurementmetabolomicsmetabonomicsmetastasis in the livermetastasis to the livermetastasize to the livermetastatic cancer to livermetastatic colo-rectalmetastatic colo-rectal cancermetastatic colo-rectal carcinomametastatic colon cancermetastatic colorectalmetastatic colorectal cancermetastatic colorectal carcinomametastatic livermetastatic liver neoplasmmouse modelmurine modelnovelpathwaypatient derived xenograft modelpharmaceutical interventionpharmacologicpharmacological interventionpharmacological therapypharmacology interventionpharmacology treatmentpharmacotherapeuticsplatelet factor IVpre-clinicalpre-clinical studypreclinicalpreclinical studyrecruitrefractory cancerresistantresistant cancersecondary liver malignancysecondary malignant liver neoplasmsmall moleculetandem mass spectrometrytherapeutic efficacytherapeutically effectivetherapy efficacythree dimensionaltranscription factortrial regimentrial treatmentubiquinationubiquitin conjugationubiquitin ligaseubiquitin-protein ligasev-Ki-RAS2 Kirsten Rat Sarcoma 2 Viral Oncogene Homologv-raf Murine Sarcoma Viral Oncogene Homolog B1β-catenin
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Full Description

Project Summary/Abstract
The advanced colon cancer with organ invasion and liver metastasis are the most common cause of colon cancer

death in part due to the resistance to current standard therapies. The ultimate goal of this project is to develop

small-molecule degraders of small ubiquitin-related modifier 1 (SUMO1) as the first-in-class anticancer drugs for

treatment of advanced colon cancers. To achieve this goal, we have already identified SUMO1 as a cancer drug

target, developed cancer cell-based drug screen, identified the hit compound, and optimized the more potent

lead compounds through chemical modification of the hit compound. Investigating the drug-targeted pathway,

we have identified the compound binding cytoplasmic activation/proliferation-associated protein-1 (CAPRIN1)

and revealed the CAPRIN1-CUL1 ubiquitin ligase complex. Upon the binding of CAPRIN1, SUMO1 degraders

induce the recruitment of SUMO1 to CAPRIN1-CUL1 ligase for SUMO1 ubiquitination and degradation in cancer

cells. Using genetically characterized human colon cancer cell lines, 3-dimensional (3D) organoids and patient’s

derived xenografts (PDXs), we have provided the proof-of-principle that targeting SUMO1 by its degraders is a

safe and effective therapy for colon cancer. The objective of this project is to investigate the mechanism and

therapeutic efficacy of SUMO1 degraders in treatment of advanced colon cancer, alone and in combination of

the standard chemotherapy. To achieve this, we will first evaluate the therapeutic efficacy of the lead compounds

in treatment of advanced colon cancer in Aim 1. To this end, we will test the in vivo toxicity, target engagement

biomarker and therapeutic efficacy of the lead compounds using genetically characterized advanced colon

cancer PDX models. Next, we will determine how SUMO1 degraders drive metabolic reprograming of glycolysis

and glutaminolysis in advanced colon cancer for the anticancer activity (Aim 2). We will reveal the mechanism

on how the degraders regulate the sumoylation of the transcription of the metabolic StAR-related lipid transfer

domain protein-7 (STARD7) in advanced colon cancer. Finally, we will determine the mechanism and therapeutic

efficacy of the combination of the lead compounds and standard chemotherapy in treatment of advanced colon

cancer in Aim 3. In particular, we will determine whether the metabolic enzyme G6PD (glucose-6-phosphate

dehydrogenase) is conjugated by SUMO1 and thus SUMO1 degraders eliminates its conjugation and functions

and sensitize colon cancers to the standard chemotherapy. Next, we will evaluate the therapeutic efficacy of the

combination of the degraders and chemotherapy in treatment of a large panel of genetically characterized 3D

organoid and PDX models. Upon completion, we expect that this preclinical project will provide solid scientific

foundation for development of SUMO1 degraders as the first-in-class anticancer drugs for treatment of advanced

colon cancer, a deadly human disease.

Grant Number: 5R01CA266699-04
NIH Institute/Center: NIH

Principal Investigator: Anita Bellail

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