grant

Role of TNF receptor 2 on Pulmonary Group 2 Innate Lymphoid Cells

Organization UNIVERSITY OF SOUTHERN CALIFORNIALocation Los Angeles, UNITED STATESPosted 15 Dec 2021Deadline 30 Nov 2026
NIHUS FederalResearch GrantFY2025(TNF)-αATAC sequencingATAC-seqATACseqAffectAirway DiseaseAirway Hyper-responsivenessAllergic DiseaseAllergic asthmaAllergyAnti-InflammatoriesAnti-Inflammatory AgentsAnti-Tumor Necrosis Factor TherapyAnti-inflammatoryAssay for Transposase-Accessible Chromatin using sequencingAsthmaAutomobile DrivingAutoregulationB Cell Differentiation Factor IB cell growth factor 2B-Cell Growth Factor-IIBCGF-IIBCGF2Basal Transcription FactorBasal transcription factor genesBiologyBloodBlood Reticuloendothelial SystemBronchial AsthmaBronchial-Dilating AgentsBronchodilator AgentsBronchodilatorsCD 120a AntigenCD 120b AntigenCD120a AntigensCD120b AntigensCSIFCSIF-10CachectinCachectin ReceptorsCell BodyCell Communication and SignalingCell IsolationCell SegregationCell SeparationCell Separation TechnologyCell SignalingCell SurvivalCell ViabilityCellsClinicalComplementComplement ProteinsCytokine Synthesis Inhibitory FactorDataDevelopmentDiseaseDisorderEffector CellEo-CSFEosinophil Differentiation FactorEpithelial CellsExtensive DiseaseExtrinsic asthmaFlow CytofluorometriesFlow CytofluorometryFlow CytometryFlow MicrofluorimetryFlow MicrofluorometryGeneral Transcription Factor GeneGeneral Transcription FactorsGeneralized DiseaseGenerationsGlycolysisGoalsHealth Care CostsHealth CostsHomeostasisHumanIL-10IL-13IL-5IL10IL10AIL13IgA enhancing factorImmuneImmunesImmunomodulationImmunosuppressantsImmunosuppressive AgentsImmunosuppressive drugImmunosuppressive treatmentInterleukin 10 PrecursorInterleukin 5 PrecursorInterleukin-10Interleukin-13Interleukin-5Intermediary MetabolismIntracellular Communication and SignalingKnowledgeLaboratoriesLungLung InflammationLung Respiratory SystemLymphoid CellMacrophage-Derived TNFMetabolicMetabolic PathwayMetabolic ProcessesMetabolismMiceMice MammalsModern ManMonitorMonocyte-Derived TNFMorbidityMorbidity - disease rateMurineMusOxidative PhosphorylationOxidative Phosphorylation PathwayPathogenesisPathway interactionsPhenotypePhysiological HomeostasisPneumologyPneumonitisPneumonologyPopulationPre-Clinical ModelPreclinical ModelsPrevalenceProductionPulmonary InflammationPulmonary MedicinePulmonologyReceptors, Tumor Necrosis Factor, Type IIReportingResearchRespiratory TherapyRoleSignal TransductionSignal Transduction SystemsSignalingSourceStimulusT cell replacing factorT-Cell Replacing FactorTNFTNF ATNF AlphaTNF Receptor Family ProteinTNF Receptor SuperfamilyTNF Receptor p55TNF ReceptorsTNF geneTNF therapyTNF-R2TNF-RIITNF-sR55TNF-αTNF-α receptorTNFATNFARTNFBRTNFRTNFR p60TNFR p75TNFR, 55-kDTNFR, 60-kDTNFR-ITNFR1TNFR2TNFR55TNFR60TNFR80TNFRSF1ATNFRSF1A ReceptorTNFRSF1A geneTNFRSF1BTNFRSF1B ReceptorTNFRSF1B geneTNFalpha receptorTNFαTNFα receptorTherapeuticTranscription Factor Proto-OncogeneTranscription factor genesTranslatingTumor Necrosis FactorTumor Necrosis Factor Beta ReceptorTumor Necrosis Factor ReceptorTumor Necrosis Factor Receptor 1Tumor Necrosis Factor Receptor 2Tumor Necrosis Factor Receptor 55Tumor Necrosis Factor Receptor 75Tumor Necrosis Factor Receptor FamilyTumor Necrosis Factor Receptor SuperfamilyTumor Necrosis Factor Receptor Type 2Tumor Necrosis Factor TherapyTumor Necrosis Factor-alphaWidespread DiseaseWorkadaptive immunityairway epithelium inflammationairway hyper-reactivityairway hyperactivityairway hyperreactivityairway hyperresponsivenessairway hypersensitivityairway inflammationanti-TNF therapyanti-TNF-alpha therapyassay for transposase accessible chromatin followed by sequencingassay for transposase accessible chromatin seqassay for transposase accessible chromatin sequencingassay for transposase-accessible chromatin with sequencingasthma patientasthmaticasthmatic patientatopic asthmabiological signal transductioncell sortingcohortcomplementationcytokinedesigndesigningdevelopmentaldrivingexperienceextrinsic allergic asthmafatty acid oxidationflow cytophotometryglobal gene expressionglobal transcription profileimmune modulationimmune regulationimmune suppressive agentimmune suppressorimmunologic reactivity controlimmunomodulatoryimmunoregulationimmunoregulatoryimmunosuppressive substanceimmunosuppressorlipidomicslumen dilatormouse modelmurine modelnew drug treatmentsnew drugsnew pharmacological therapeuticnew therapeuticsnew therapynext generation therapeuticsnovel drug treatmentsnovel drugsnovel pharmaco-therapeuticnovel pharmacological therapeuticnovel therapeuticsnovel therapypathwaypulmonaryrespiratory inflammationrespiratory tract inflammationresponsescRNA sequencingscRNA-seqside effectsingle cell RNA-seqsingle cell RNAseqsingle cell expression profilingsingle cell genomicssingle cell transcriptomic profilingsingle-cell RNA sequencingsocial rolestandard of caresystemic toxicitytranscription factortranscriptometranscriptomicstumor necrosis factor alpha receptortumor necrosis factor receptor 1Atumor necrosis factor receptor superfamily, member 1Btumor necrosis factor α receptor
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Full Description

Abstract
The long-term goal of this project is to develop better therapies for respiratory inflammation and allergic

asthma. Group 2 innate lymphoid cells (ILC2) are a recently identified cell population producing type 2

cytokines in response to a growing number of environmental signals and epithelial cell-derived cytokines.

Studies show increased ILC2 activity in asthma and many widespread diseases, as ILC2s are sufficient to

induce airway inflammation independent of adaptive immunity in mice. The proposed research plan is

motivated by recent new observations from our laboratory and others that the TNF/TNFR2 axis controls ILC2-

dependent airway inflammation (Cell Report 2019, J Allergy Clin Immunol. 2020). High levels of TNF are

found in the lungs of asthmatic patients, however anti-TNF therapy is generally associated with systemic

toxicity due to the existence of two distinct functionally different receptors for TNF: TNFR1 and TNFR2. Our

results suggest that TNF enhanced the secretion of ILC2 effector cytokines IL-5 and IL-13 and increased

survival via TNFR2 signaling, leading to airway inflammation. However, how the TNF/TNFR2 axis

mechanistically affects ILC2s and subsequent development of airway inflammation remains to be explored.

Based on our data, we hypothesize that blocking TNFR2 on ILC2s induces an immunoregulatory phenotype

fueling on a distinct metabolic source, together favoring the reduction of AHR. In Specific Aim 1 (SA1), we

have designed several approaches to characterize the effects of TNF on ILC2 effector functions and lung

inflammation. Our preliminary data suggest that TNFR2 is heterogeneously expressed on activated ILC2s. We

will therefore characterize the transcription factors driving the effects of TNF in ILC2s using a combination of

single cell genomic and transcriptomic analysis. Furthermore, data from our laboratory and others suggest that

metabolic processes in ILC2s are dependent on the generation of energy from fatty acid oxidation (FAO) and

oxidative phosphorylation. Interestingly our results clearly show a metabolic shift towards glycolysis in TNFR2-/-

ILC2s. Based on these results we intend to assess glycolysis and FAO mechanisms in WT and TNFR2-/- ILC2s

in SA2. Finally, we previously showed that human ILC2s express TNFR2 and humanized ILC2 mice developed

TNFR2-dependent AHR in response to TNF. Therefore, we intend to assess in the SA3 the relevance of our

findings in asthmatic patients. We will collect lung and blood ILC2s from carefully selected cohorts of

mild/moderate, severe asthmatics and healthy donors and correlate the levels of TNF in the BAL to the

numbers of ILC2s/expression of TNFR2, as well as monitor other cells that express TNFR2. These studies,

based on strong preliminary data, will focus on developing novel therapy for allergic asthma. In order to

achieve these results we have assembled a team including leading experts in lung biology and the chief of

clinical pulmonology to complement our extensive experience in pre-clinical models.

Grant Number: 5R01HL159804-04
NIH Institute/Center: NIH

Principal Investigator: OMID AKBARI

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