grant

Role of HIV gp120 and Nef in Transcriptome Dysregulation and Pulmonary Vascular Remodeling

Organization TEXAS TECH UNIVERSITY HEALTH SCIS CENTERLocation LUBBOCK, UNITED STATESPosted 1 Dec 2023Deadline 30 Nov 2027
NIHUS FederalResearch GrantFY20265-LipoxygenaseAIDSAIDS VirusAIDS focused researchAIDS related researchAIDS researchAIDS scienceAIDS specific researchAcquired Immune DeficiencyAcquired Immune Deficiency SyndromeAcquired Immune Deficiency Syndrome VirusAcquired Immunodeficiency SyndromeAcquired Immunodeficiency Syndrome VirusAddressAdvanced HIVAffectAlanineAllelesAllelomorphsApoptosisApoptosis PathwayArachidonate 5-LipoxygenaseArachidonic Acid 5-LipoxygenaseAreaAutomobile DrivingBlood VesselsBody TissuesCXC-R4CXCR-4CXCR4CXCR4 Signaling PathwayCXCR4 geneCell BodyCell Communication and SignalingCell FunctionCell PhysiologyCell ProcessCell SignalingCell SurvivalCell ViabilityCellsCellular FunctionCellular PhysiologyCellular ProcessCellular injuryCessation of lifeChemokine Receptor GeneChronicComplexD2S201EDNA AlterationDNA Sequence AlterationDNA mutationDataDeathDevelopmentDiseaseDisorderDysfunctionEndothelial CellsEndotheliumEnsureFB22Functional disorderFutureGene variantGenetic AlterationGenetic ChangeGenetic PolymorphismGenetic defectGenetic mutationHIVHIV Envelope Glycoprotein gp120HIV Envelope Protein gp120HIV env Protein gp120HIV focused researchHIV in patientsHIV individualsHIV infected individualsHIV infected personsHIV investigationHIV patientHIV peopleHIV positive individualsHIV positive patientHIV positive peopleHIV related researchHIV researchHIV scienceHIV specific researchHM89HSY3RRHTLV-III gp120HeartHeart failureHumanHuman Immunodeficiency VirusesHuman immunodeficiency virus infected patientsHuman immunodeficiency virus positive patientsIL-7IL-7 GeneIL7IL7 ProteinIL7 geneImmune systemIn VitroIndividualInflammationInjuryInterleukin 7 PrecursorInterleukin 7 Precursor GeneInterleukin-7Interleukin-7 GeneIntracellular Communication and SignalingInvestigation on HIVInvestigatorsKnowledgeL-ProlineLAP3LAV-HTLV-IIILCR1LESTRLTA4 SynthaseLeadLeiomyocyteLeukotriene A SynthaseLeukotriene A4 SynthaseLeukotriene A4 SynthetaseLeukotrienesLiteratureLungLung DiseasesLung Respiratory SystemLymphadenopathy-Associated VirusLymphopoietin-1MediatingMiceMice MammalsModelingModern ManMolecularMolecular CloningMolecular FingerprintingMolecular ProfilingMurineMusMutationMutation DetectionNHLBINPY3RNPYRNPYRLNPYY3RNational Heart, Lung, and Blood InstituteOrganPLWHPTK ReceptorsPWHParacrine CommunicationParacrine SignalingPathogenesisPathogenicityPathway interactionsPatientsPatients living with HIVPatients suffering from HIVPb elementPhenotypePhysiopathologyPilot ProjectsPolymorphism AnalysisPolymorphism DetectionPopulationPositionPositioning AttributePredispositionProductionProgrammed Cell DeathProlineProteinsPublishingPulmonary DiseasesPulmonary DisorderPulmonary HypertensionReceptor Protein-Tyrosine KinasesReceptor Tyrosine Kinase GeneResearchResearch PersonnelResearch PriorityResearchersResistanceRight Ventricular HypertrophyRoleSamplingSequence AlterationSevere HIV DiseaseSignal PathwaySignal TransductionSignal Transduction SystemsSignalingSmooth Muscle CellsSmooth Muscle MyocytesSmooth Muscle Tissue CellSubcellular ProcessSusceptibilityTestingTherapeuticTissuesTransmembrane Receptor Protein Tyrosine KinaseTyrosine Kinase Linked ReceptorsTyrosine Kinase ReceptorsVariantVariationVascular DiseasesVascular DisorderVascular Smooth MuscleVirionVirusVirus ParticleVirus-HIVWorkadaptive immune responseallelic variantantiretroviral therapyantiretroviral treatmentbiological signal transductionblood vessel disordercardiac failurecell damagecell injurycellular damagechemokine receptorco-morbidco-morbiditycomorbidityconstrictiondamage to cellsdevelopmentaldisease of the lungdisorder of the lungdrivingepigenomicsexperimentexperimental researchexperimental studyexperimentsgenetic variantgenome mutationgenomic alterationgenomic variantglobal gene expressionglobal transcription profilegp120gp120 ENV Glycoproteingp120(HIV)heavy metal Pbheavy metal leadhemodynamicshigh riskhuman immunodeficiency virus patienthuman immunodeficiency virus researchimpaired pulmonary vascularizationin vivoindividuals infected with HIVindividuals with HIVindividuals with human immunodeficiency virusinjuriesinjury to cellslung artery blood pressurelung disorderlung vascular cellslung vascular diseaselung vascular remodelingmolecular profilemolecular signaturemouse modelmurine modelnefnef Gene Productsnef Proteinnew drug treatmentsnew drugsnew pharmacological therapeuticnew therapeuticsnew therapynext generation therapeuticsnormotensivenovelnovel drug treatmentsnovel drugsnovel pharmaco-therapeuticnovel pharmacological therapeuticnovel therapeuticsnovel therapypathogenic viruspathophysiologypathwaypatient infected with HIVpatient with HIVpeople infected with HIVpeople infected with human immunodeficiency viruspeople living with HIVpeople with HIVpeople with human immunodeficiency viruspilot studypolymorphismpolypeptidepressure in pulmonary arteriespreventpreventingproliferation capabilityproliferation capacityproliferation potentialproliferative capabilityproliferative capacityproliferative potentialpulmonarypulmonary arterial blood pressurepulmonary arterial endothelial cellpulmonary arterial pressurepulmonary artery endothelial cellpulmonary artery pressurepulmonary artery systolic pressurepulmonary vascular cellspulmonary vascular diseasepulmonary vascular disorderpulmonary vascular dysfunctionpulmonary vascular remodelingpulmonary vasculopathyresearch addressing HIVresearch in HIVresearch into HIVresearch on HIVresearch on human immunodeficiency virusresearch to address HIVresistantresponseright ventricle hypertrophyscATAC sequencingscATAC-seqscRNA sequencingscRNA-seqscience on HIVscience to address HIVsingle cell ATAC-seqsingle cell ATAC-sequencingsingle cell Assay for Transposase Accessible Chromatin sequencingsingle cell RNA-seqsingle cell RNAseqsingle cell expression profilingsingle cell sequencing assay for transposase accessible chromatinsingle cell transcriptomic profilingsingle-cell Assay for Transposase-Accessible Chromatin with sequencingsingle-cell RNA sequencingsingle-cell assay for transposase-accessible chromatin using sequencingsingle-cell assay for transposase-accessible chromatin-seqsocial rolesrc Kinasessrc Protein-Tyrosine Kinasessrc Tyrosine Kinasessrc-Family Kinasessrc-Family Tyrosine Kinasesstudies on HIVtranscriptometranscriptomicsvascularvascular constrictionvascular dysfunctionvasculopathyvasoconstrictionviral pathogenvirus pathogen
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Full Description

PROJECT SUMMARY
People living with HIV (PLWH) are at a significantly high risk of developing Pulmonary Hypertension (PH),

which can lead to death by heart failure, even with the suppressive effects of antiretroviral therapy (ART). PH is

characterized by phenotypic changes in endothelial cells that result in increased pulmonary artery pressures and

right ventricular hypertrophy. However, the underlying mechanism of how HIV contributes to the development of

HIV-PH is still not fully understood. Our team has previously identified an association between specific HIV

polymorphisms and the susceptibility to HIV-PH in patients. This proposal focuses on increasing the knowledge

of how the pulmonary vasculature responds to HIV and determining how specific HIV polymorphisms contribute

to the pathogenesis of HIV-associated vascular disease. To address this gap in knowledge, and guided by the

literature and our preliminary studies, we propose conducting experiments in human vascular cells in vitro and

in hu-mice to investigate the role of the CXCR4 signaling pathway elicited by HIV-PH polymorphisms in ECs, the

impact of HIV-PH variants and ART in SMC constriction in vitro and in pulmonary vascular hemodynamics in hu-

mice and transcriptomics (using scRNA-seq) and epigenomics (using scATAC-seq) changes induced by HIV-

PH in pulmonary vascular cell sub-populations in hu-mice. This proposal addresses high-priority research areas

established by the Office of AIDS Research and the NHLBI by addressing PH as an HIV-associated comorbidity

that is not improved by ART. Our findings will inform future therapeutic advances tailored to HIV-PH. The

strengths of this proposal build upon its multifaceted approach, compelling data on the role of HIV proteins in

PH, access to HIV-PH biospecimens, utilization of a novel mouse model of HIV-PH, and a strong team of

investigators with significant and complementary expertise.

Grant Number: 5R01HL172709-03
NIH Institute/Center: NIH

Principal Investigator: SHARILYN ALMODOVAR

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