grant

Neural mechanisms of sensory encoding after photoreceptor degeneration

Organization UNIVERSITY OF CALIFORNIA, SAN FRANCISCOLocation SAN FRANCISCO, UNITED STATESPosted 1 Jan 2025Deadline 31 Dec 2027
NIHUS FederalResearch GrantFY202521+ years oldAdultAdult HumanAffectAge related macular degenerationAge-Related MaculopathyApoptosisApoptosis PathwayAttenuatedAutomobile DrivingBehaviorBehavior assessmentBehavioralBlindnessCell BodyCell Communication and SignalingCell SignalingCellsCodeCoding SystemCognitive DiscriminationCompensationComputer ModelsComputerized ModelsConeConsciousConsciousnessDegenerative Neurologic DisordersDependenceDetectionDiagnosticDiscriminationEarly DiagnosisEarly treatmentEye MovementsHistologicHistologicallyImplantIndividualInferiorIntracellular Communication and SignalingLab FindingsLabelLaboratory FindingLinkMeasuresMiceMice MammalsModelingMotionMurineMusNerve CellsNerve UnitNervous System Degenerative DiseasesNeural CellNeural Degenerative DiseasesNeural degenerative DisordersNeurocyteNeurodegenerative DiseasesNeurodegenerative DisordersNeurologic Degenerative ConditionsNeuronsNeurophysiology - biologic functionNoiseOpsinOpticsOutputPatientsPersonsPhotoreceptor CellPhotoreceptorsPhotosensitive CellPigmentary RetinopathyPopulationProgrammed Cell DeathPropertyReactionReflexReflex actionResearchRetinaRetinal DegenerationRetinal Ganglion CellsRetinitis PigmentosaRod-OpsinRoleSamplingSightSignal TransductionSignal Transduction SystemsSignalingSourceStimulusSystemTapetoretinal DegenerationTestingVisionVisualVisual PerceptionVisual ReceptorVisual Systemadulthoodage dependent macular degenerationage induced macular degenerationage related macular diseaseage related macular dystrophyattenuateattenuatesbehavioral assessmentbiological signal transductioncell typecomputational modelingcomputational modelscomputer based modelscomputer based predictioncomputerized modelingdegenerative diseases of motor and sensory neuronsdegenerative neurological diseasesdegenerative retina diseasesdevelop therapydrivingearly detectionearly therapygangliocyteganglion cellimprovedintervention developmentloss of functionmosaicmouse modelmurine modelnatural agingneuralneural functionneural mechanismneurodegenerative illnessneuromechanismneuronalnormal agingnormative agingnovelopticalpharmacologicphotoreceptor degenerationpredictive modelingprogenitor cell replacementresponserestore sightrestore visionretina degenerationretinal degenerativeretinal degenerative diseasesretinal ganglionrod and cone dystrophyrod-cone dystrophysenile macular diseasesensory mechanismsight restorationsocial rolespatial and temporalspatial temporalspatiotemporalstem cell replacementtherapy developmenttreatment developmentvision lossvision restorationvisual functionvisual lossvisual stimulus
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Full Description

PROJECT SUMMARY/ABSTRACT
Studies have found that patients with retinal degeneration can lose up to half of all cones before visual deficits

are observed, suggesting a nonlinear relationship between cone loss and visual function. Previous studies from

our lab have demonstrated that compensation can occur at the level of individual retinal circuits, however it

remains unknown if all circuits react in the same way to cone loss. Loss of cone inputs disrupts stimulus

detection, which relies on neurons to use both signal and noise to represent stimulus properties. Empirical and

simulated neural activity of motion-sensitive cells suggest that, across neural populations, correlations in noise

(variability in stimulus-driven responses) can benefit stimulus encoding. However, the impact of noise

correlations in population coding and on visual behaviors is not fully understood. Remodeling of retinal circuitry

following cone degeneration may disrupt these neural computations, yet current approaches to vision restoration,

like stem cell replacement or electrical implants, rely on using the existing neural function after cone loss.

Consequently, it is critical to understand neural computation in individual retinal circuits after retinal degeneration.

To study this, we will leverage the dependence of the vertical optokinetic reflex (OKR), a visual behavior that

tracks global motion in the visual space, on the ON-direction selective ganglion cell (oDSGC). Two types of

oDSGCs prefer upward (Superior) or downward (Inferior) motion in visual space and form unique mosaics across

the retina, thus represent overlapping regions of visual space. The central hypothesis is that cone degeneration

disrupts shared cones between oDSGCs, which decreases noise correlations and decreases fidelity in the OKR

response. In these studies, we will use the cone-DTR mouse model, where selective apoptosis of M-opsin cones

can be induced in the adult mouse retina. We will characterize correlated noise in neighboring oDSGCs using

simultaneous paired recordings to determine the relationship between common inputs and noise correlations in

control and cone-deficient mice. These measures will be compared with histological and functional measures of

shared cone inputs. We will measure intracellular responses of oDSGCs to determine if noise correlations are

driven by inner retinal circuitry, and use pharmacological blockade to identify cell-specific sources of noise

correlations. Next, we will investigate the role of noise correlations in the computations underlying the OKR using

a model to test if opposing oDSGC type responses are subtracted prior to or after nonlinear pooling. We will

define the extent of oDSGC pooling by determining the representation of cones in visual space that elicits the

OKR using behavioral assessments of the OKR across stimulus size. Lastly, we will determine if these models

can predict the OKR in response to a novel noise correlation stimulus and following cone loss. These studies

will improve our understanding of the role of noise correlations in motion detection at the cellular, computational,

and behavioral levels.

Grant Number: 1F32EY037105-01
NIH Institute/Center: NIH

Principal Investigator: Annika Balraj

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