grant

Multi-omics profiling of individual exosomes for origin-tracing, biomarker discovery, and biological function characterization

Organization WELLSIM BIOMEDICAL TECHNOLOGIES, INC.Location San Jose, UNITED STATESPosted 1 Mar 2022Deadline 31 Jul 2026
NIHUS FederalResearch GrantFY2025AccelerationAddressAffectAssayBar CodesBioassayBiogenesisBiologicalBiological AssayBiological FunctionBiological ProcessBiomedical TechnologyBlood PlasmaBody TissuesBrittle Diabetes MellitusClinicalCodeCoding SystemCommunitiesDedicationsDetectionDevelopmentDiagnosisDiagnosticDiameterDimensionsDiseaseDisorderDrug DeliveryDrug Delivery SystemsEnsureExhibitsFailureFunctional RNAGene ExpressionGene Expression MonitoringGene Expression Pattern AnalysisGene Expression ProfilingGene TranscriptionGenesGenetic TranscriptionGoalsHeterogeneityHybridsIDDMIndividualInsulin-Dependent Diabetes MellitusJuvenile-Onset Diabetes MellitusKetosis-Prone Diabetes MellitusLabelLibrariesLiquid substanceMembrane Protein GeneMembrane ProteinsMembrane-Associated ProteinsMessenger RNAMethodsMicrofluidicsNGS MethodNGS systemNon-Polyadenylated RNANoncoding RNANontranslated RNAOrigin of LifeOutcomePhase I StudyPlasmaPlasma SerumPoly TPoly dTPolydeoxythymidylatePolythymidylic AcidsPopulationPreparationProteinsProtocolProtocols documentationQuality ControlRNARNA ExpressionRNA Gene ProductsRNA SeqRNA sequencingRNAseqReagentResearchResolutionReticuloendothelial System, Serum, PlasmaRibonucleic AcidSBIRSamplingSmall Business Innovation ResearchSmall Business Innovation Research GrantSubgroupSudden-Onset Diabetes MellitusSurfaceSurface ProteinsSystemSystems IntegrationT1 DMT1 diabetesT1DT1DMTechniquesTechnologyTestingThymine PolynucleotidesTissuesTranscript Expression AnalysesTranscript Expression AnalysisTranscriptionType 1 Diabetes MellitusType 1 diabetesType I Diabetes MellitusUntranslated RNAUrineVariantVariationanalytical methodanalyze gene expressionbarcodebiologicbiomarker discoverydesigndesigningdevelopmentalexosomeextracellular vesiclesfluidgene expression analysisgene expression assayhomopolymer 5'-Thymidylic acidimprovedindividual heterogeneityindividual variabilityindividual variationinnovateinnovationinnovativeinsightinsulin dependent diabetesinsulin dependent type 1integrated systemjuvenile diabetesjuvenile diabetes mellitusketosis prone diabetesliquidmRNAmulti-modalitymultimodalitymultiomicsmultiple omicsneglectnext gen sequencingnext generation sequencingnextgen sequencingnoncodingpanomicsphase 1 studyprecision medicineprecision-based medicinepreparationsprotein expressionresolutionssystem integrationtargeted drug therapytargeted drug treatmentstargeted therapeutictargeted therapeutic agentstargeted therapytargeted treatmenttechnological innovationtooltranscriptional profilingtranscriptome sequencingtranscriptomic sequencingtype I diabetestype one diabetesµfluidic
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Full Description

PROJECT SUMMARY / ABSTRACT
Extracellular vesicles (EVs) exhibit high heterogeneity in biofluids, a feature that traditional bulk-level analysis

approaches fail to capture in terms of individual variations. While numerous techniques exist for single-EV

analysis, the majority focus primarily on profiling surface proteins. Transcriptional analysis at the level of

individual EVs, however, remains largely unexplored. To bridge this gap, we propose the development of a

technology for multimodal profiling of individual EVs, leveraging next-generation sequencing and an optimized

method for multiplex library preparation. This proposed platform will serve as a unique tool for high-throughput,

integrative profiling of single-EV gene expression and surface proteins. It aims to offer high-sensitivity, multi-

dimensional biological insights, thereby potentially accelerating the advancement of EV-based diagnostics and

targeted therapies.

Grant Number: 5R44GM145015-03
NIH Institute/Center: NIH

Principal Investigator: Yuchao Chen

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