grant

Metabolic Immunomodulation of Wound-Associated Macrophage Functional Plasticity as a Novel Diagnostic Target in Diabetic Veterans

Organization BOISE VA MEDICAL CENTERLocation BOISE, UNITED STATESPosted 1 Jan 2022Deadline 31 Dec 2026
VANIHUS FederalResearch GrantFY2025Activities of Daily LivingActivities of everyday lifeAddressAlgorithmsAmputationAnti-InflammatoriesAnti-Inflammatory AgentsAnti-inflammatoryAssayAssessment instrumentAssessment toolBenchmarkingBest Practice AnalysisBioassayBiological AssayBiological MarkersBlindedBlood NeutrophilBlood Polymorphonuclear NeutrophilBlood SerumBody TissuesCare GiversCaregiversCaringCausalityCellular Metabolic ProcessCharacteristicsChemotactic CytokinesChronicClinicalCollecting CellComplexComputational toolkitComputer ModelsComputerized ModelsDataDebridementDevelopmentDiabetes MellitusDiabetic woundDysfunctionEconomic BurdenEtiologyExpression SignatureFISH TechnicFISH TechniqueFISH analysisFISH assayFluorescence In Situ HybridizationFluorescent in Situ HybridizationFoundationsFunctional disorderFutureGene ExpressionGene Expression ProfileGoalsGrowth AgentsGrowth FactorGrowth SubstancesHealthHealth Care SystemsHomologous Chemotactic CytokinesHumanImmunityImmunohistochemistryImmunohistochemistry Cell/TissueImmunohistochemistry Staining MethodImmunomodulationIn SituIndividualInflammationInflammatoryInnate ImmunityIntercrinesIntermediary MetabolismKnowledgeLower ExtremityLower LimbMachine LearningMacrophageMarrow NeutrophilMedicalMembrum inferiusMetabolicMetabolic ProcessesMetabolismModelingModern ManMolecularMyelogenousMyeloidNative ImmunityNatural ImmunityNeutrophilic GranulocyteNeutrophilic LeukocyteNon-Specific ImmunityNonspecific ImmunityPatientsPhenotypePhysiopathologyPolymorphonuclear CellPolymorphonuclear LeukocytesPolymorphonuclear NeutrophilsPopulationProcessProteins Growth FactorsProteomicsQOLQuality of lifeR-Series Research ProjectsR01 MechanismR01 ProgramResearchResearch GrantsResearch Project GrantsResearch ProjectsResearch SpecimenResolutionRoleSIS cytokinesSamplingSerumSkinSpecimenSystemSystems BiologyTestingTherapeuticTherapeutic InterventionTimeTissuesTranslatingTranslationsTreatment ProtocolsTreatment RegimenTreatment ScheduleVeteransVeterans Health AdministrationVeterans Health AffairsWound RepairWound modelsamputated limbbenchmarkbio-markersbiologic markerbiomarkerbiomarker discoverybiomarker identificationbiomarker selectioncandidate biomarkercandidate markercandidate selectioncausationcell metabolismcellular metabaolismchemoattractant cytokinechemokineclinical careclinical relevanceclinically actionableclinically relevantcomputational modelingcomputational modelscomputational toolboxcomputational toolscomputational toolsetcomputer based modelscomputer based predictioncomputerized modelingcomputerized toolscostcytokinedaily living functiondaily living functionalitydesigndesigningdevelopmentaldiabetesdiabetes managementdiabetes mellitus managementdiabetes ulcerdiabeticdiabetic managementdiabetic patientdiabetic skin wounddiabetic ulcerdisableddisease causationeconomic costefficacy testingfunctional abilityfunctional capacityfunctional plasticitygene expression patterngene expression signaturehealinghigh dimensionalityidentification of biomarkersidentification of new biomarkersimmune modulationimmune regulationimmunologic reactivity controlimmunomodulatoryimmunoregulationimmunoregulatoryinnovateinnovationinnovativeintervention therapylimb amputationlipidomicsmachine based learningmarker identificationmetabolic phenotypemetabolic profilemetabolism measurementmetabolomicsmetabonomicsmetabotypemicrobiomemilitary veteranneutrophilnew diagnosticsnew drug targetnew druggable targetnew pharmacotherapy targetnew therapeutic targetnew therapy targetnext generation diagnosticsnon-healing woundsnonhealing woundsnovelnovel diagnosticsnovel drug targetnovel druggable targetnovel pharmacotherapy targetnovel therapeutic targetnovel therapy targetpathophysiologypersistent woundspre-clinicalprecision medicineprecision-based medicinepreclinicalpredictive modelingpredictive toolsrandom forestresolutionsresponders and non-respondersresponders from non-respondersresponders or non-respondersresponders versus non-respondersresponders vs non-respondersresponders/nonresponderssocial rolestandard of carestatisticstargeted biomarkertemporal measurementtemporal resolutiontime measurementtissue woundtooltranscriptional profiletranscriptional signaturetranslationtreat woundveteran populationwoundwound assessmentwound carewound healingwound healing modelswound managementwound monitoringwound recoverywound resolutionwound therapeuticswound therapywound treatmentwoundingwounds
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Full Description

Within the Veterans Affairs healthcare system, around 25% of military veterans have diabetes
and the economic burden of lower limb amputations exceeded $200 million for fiscal year 2010.

Beyond the economic costs, the loss of mobility and independence in these veterans has a significant

impact on veteran quality of life and that of their caregivers. Despite innovations in both wound care

and diabetes management, diabetic ulcers remain the leading cause of amputation for VA patients.

Normal wound healing in healthy individuals initiates quickly and proceeds through well-

characterized, iterative steps; however, in diabetic wounds, the healing process stalls at the transition

between resolution of inflammation and initiation of tissue reorganization. In healthy individuals, this

transition is characterized by a shift away from inflammation and an associated population shift in

macrophages (Mф). It has been well established that there is a correlation between inflammation and

diabetes; however, the role of chronic inflammation at the skin in diabetics has not been explored.

MΦs display remarkable functional plasticity and are generally are divided into M1 MΦs

(classically activated, pro-inflammatory) and a broad set of M2 MΦs (alternatively activated, anti-

inflammatory). M2 MΦs have been further subdivided into M2a, M2b, M2c, and M2d subtypes. Our

preliminary data demonstrate that metabolic landscape within the wound is an important variable in

healing and supports our overarching idea that immunomodulation of wound-associated MΦs is

necessary for wound resolution. The primary goal of this research project is to develop a preliminary

model of biomarkers that can accurately predict whether a wound will either respond or not respond to

current standards of care.

To achieve this goal, we will utilize an ex vivo MΦ polarization model to quantify the impact of

host metabolic health (based on donor HemA1c serum levels) on MΦ functional phenotype. MΦ

plasticity will be quantified using a Complex Systems Biology approach, incorporating multiplexed

cytokine/chemokine/growth factor profile with myeloid gene expression, global metabolomics, semi-

targeted lipidomics, and real-time, live cell metabolism profiling. While our ex vivo MΦ model uses

primary cells collected from human donors, confirmation of our candidate biomarkers will require

using our Complex Systems Biology approach in situ to confirm that candidate biomarkers can be

detected with clinical samples. Primary wound debridement samples will be collected over time and for

probed for candidate biomarkers by quantitative immunohistochemistry and fluorescence in situ

hybridization. Finally, primary wound tissue will be profiled over time with targeted metabolite

biomarkers to confirm efficacy of biomarkers as clinical targets.

Finally, utilizing biomarker discovery statistics based on receiver-curve-characteristic (ROC) curve

analysis, biomarkers will be selected for inclusion in our predictive model. Predictive modeling will

utilize Random Forest machine learning and test efficacy of predictive models based on benchmarks of

current clinical care, our selected biomarkers, or a combination of both. Once statistical strength of

predictive model determines best fit, the model will be assessed clinically in parallel with standard of

care. Ultimately, our hope is to lay the foundation for better prediction of wound treatment protocols,

promote design of novel wound-care therapeutics, and take the first step towards Precision Medicine

wound care for our diabetic veterans.

Grant Number: 5I01BX005344-04
NIH Institute/Center: VA

Principal Investigator: Mary Cloud Ammons

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