grant

Let-7b in BPD

Organization UNIVERSITY OF ALABAMA AT BIRMINGHAMLocation BIRMINGHAM, UNITED STATESPosted 14 Apr 2023Deadline 31 Mar 2027
NIHUS FederalResearch GrantFY20260-4 weeks old21+ years oldAdultAdult HumanAgeAlveolarAngiogenesis InhibitionAngiogenic InhibitionAttenuatedBasic ResearchBasic ScienceBiological MarkersBirthBloodBlood PlasmaBlood Reticuloendothelial SystemBlood VesselsBronchopulmonary DysplasiaCell Communication and SignalingCell Culture SystemCell Culture TechniquesCell SignalingCessation of lifeClinicalClinical TreatmentDeathDevelopmentDisease ProgressionDysfunctionEarly identificationEpithelial CellsExtremely Low Birth Weight InfantFetal LungFunctional MetagenomicsFunctional disorderGWA studyGWASGenomicsHumanHyperoxiaImmunoglobulin Enhancer-Binding ProteinImpairmentIncidenceInfantIntracellular Communication and SignalingLungLung DiseasesLung ParenchymaLung Respiratory SystemLung TissueLung Tissue FibrosisMeasuresMechanicsMediatorMessenger RNAMetagenomicsMiceMice MammalsMicroRNAsMicrobiomicsMitochondriaModelingModern ManMonitorMorbidityMurineMusNF-kBNF-kappa BNF-kappaBNFKBNewborn InfantNewbornsNuclear Factor kappa BNuclear Transcription Factor NF-kBO elementO2 elementOxidative StressOxygenParturitionPhenotypePhysiopathologyPlasmaPlasma SerumPremature InfantProspective cohortProteomicsPulmonary DiseasesPulmonary DisorderPulmonary FibrosisPulmonary HypertensionRNA SeqRNA sequencingRNAseqResearchRespiratory EpitheliumReticuloendothelial System, Serum, PlasmaRiskRoleSamplingSeverity of illnessSignal TransductionSignal Transduction SystemsSignalingSmall RNASourceStagingStructure of parenchyma of lungStructure of respiratory epitheliumTestingTimeTracheaTrachea ProperTranscription Factor NF-kBTransgenic MiceUrineVascular remodelingadulthoodagesairway epitheliumangiogenesisaspirateattenuateattenuatesbio-markersbiologic markerbiological signal transductionbiomarkerbiomarker identificationcell culturecell cultureschronic lung disease in infantschronic lung disease in neonatal infantschronic lung disease in neonateschronic lung disease in newbornschronic lung disease in prematuritychronic lung disease in preterm infantschronic lung disease of infancychronic lung disease of prematurityclinical interventionclinical therapyclinical validationcohortcytokinedevelopmentaldisease of the lungdisease severitydisorder of the lungexome sequencingexome-seqextreme prematurityextremely low birth weightextremely low birthweightextremely premature infantextremely pretermextremely preterm infantfibrosis in the lunggenome wide associationgenome wide association scangenome wide association studygenomewide association scangenomewide association studyhyperoxygenationidentification of biomarkersidentification of new biomarkersimprovedinfant chronic lung diseaseinfants born prematureinfants born prematurelyinfants with chronic lung diseaseinhibitorkappa B Enhancer Binding Proteinlung developmentlung disorderlung fibrosislung functionmRNAmarker identificationmechanicmechanicalmetabolism measurementmetabolomicsmetabonomicsmiRNAmicrobialmicrobiomemicrobiome researchmicrobiome sciencemicrobiome studiesmitochondrialmouse modelmurine modelneonatal airwayneonatal chronic lung diseasenew therapeutic approachnew therapeutic interventionnew therapeutic strategiesnew therapy approachesnew treatment approachnew treatment strategynewborn airwaynewborn childnewborn childrennewborn chronic lung diseasenormoxianovelnovel therapeutic approachnovel therapeutic interventionnovel therapeutic strategiesnovel therapy approachnuclear factor kappa betaoverexpressoverexpressionpathophysiologypost-prematurity respiratory diseasepostnatalpremature babypremature infant humanpremature lungspreterm babypreterm infantpreterm infant humanpreterm infants with chronic lung diseasepreterm lungprospectivepulmonarypulmonary functionrespiratoryrespiratory tract epitheliumresponse to therapyresponse to treatmentsocial roletherapeutic responsetherapy responsetranscriptome sequencingtranscriptomic sequencingtranscriptomicstreatment responsetreatment responsivenesstrial regimentrial treatmentvascularvery prematurevery pretermwhole genome association analysiswhole genome association studywindpipe
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Full Description

Project Summary
Bronchopulmonary dysplasia (BPD) is common in extremely low birth weight (ELBW) infants.

Recently, we discovered that the strongest biomarker signal was of microRNA let-7b-5p, with a 46-fold

increase (p<0.001) at birth in the blood of infants who subsequently developed severe BPD (versus

no BPD) many weeks later at 36w post-menstrual age. We also found a 14-fold increase of let-7b-5p on day

1 in the tracheal aspirate of infants who subsequently developed BPD. In cell culture, airway epithelial cells

were the primary source of let-7b-5p, that increased with hyperoxia. We found that excessive let-7b inhibits

angiogenesis, and that let-7b inhibition during hyperoxia improves lung development in newborn mice.

In the “Let-7b in BPD” project, we will build upon our exciting discovery of let-7b-5p as a robust

biomarker of BPD, and determine its relevance to lung development and BPD. We will test the central

hypotheses that miRNA let-7b-5p is (a) a valuable biomarker for staging, monitoring disease

progression and response to therapy, (b) is released from airway epithelial cells by oxidative stress,

(c) is a contributor to dysregulated angiogenesis in bronchopulmonary dysplasia, and (d) that

inhibition of let-7b signaling improves lung angiogenesis and attenuates the BPD phenotype.

We will test the hypotheses by the following Specific Aims:

Specific Aim 1 – Determine if plasma let-7b-5p concentrations in extremely preterm infants track with lung

disease progression and correlate with response to therapy.

Let-7b-5p will be measured in serial plasma samples from a well characterized prospective cohort of

150 extremely preterm infants. We will define the temporal changes in let-7b-5p with respiratory illness

severity, BPD staging and lung mechanics at 36w PMA, and with clinical therapies.

Specific Aim 2 – Determine the mechanisms of Let-7b release by newborn mouse lung airway epithelium

To confirm that the let-7b-5p release by oxidative stress is the key upstream mechanism, we will use

novel transgenic mice. We will test the hypothesis that reduction of mitochondrial ROS reduces let-7b-5p

and the BPD phenotype, and determine the role of Nrf2 and NF-kB signaling using specific

inhibitors/modulators in cell culture models.

Specific Aim 3 – Determine effects of excessive let-7b-5p signaling on lung microvascular development.

We will test the hypothesis that over-expression of let-7b-5p induces impaired lung microvascular

development, inducing a BPD phenotype in newborn mice even in normoxia, and that inhibition of let-7b-5p

improves lung development in hyperoxia- exposed newborn mouse lung (BPD model).

Grant Number: 5R01HL156275-04
NIH Institute/Center: NIH

Principal Investigator: Namasivayam Ambalavanan

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