grant

Identification of Rare Variants for Orofacial Clefts Using Publicly Available Datasets

Organization UNIVERSITY OF IOWALocation IOWA CITY, UNITED STATESPosted 15 Jul 2025Deadline 14 Jul 2027
NIHUS FederalResearch GrantFY20250-4 weeks old10 year old10 years of ageAddressAffectAfricanAfrican AmericanAfrican American groupAfrican American individualAfrican American peopleAfrican American populationAfrican AmericansAfrican ancestryAfrican descentAfro AmericanAfroamericanBasal Transcription FactorBasal transcription factor genesBindingBinding SitesBirth DefectsCaringCausalityChIP SequencingChIP-seqChIPseqClinicalCombining SiteComplexCongenital AbnormalityCongenital Anatomical AbnormalityCongenital DefectsCongenital DeformityCongenital MalformationDataData BasesData SetDatabasesDevelopmentDisparitiesDisparityEducationEducational aspectsEnhancersEnvironmental FactorEnvironmental Risk FactorEtiologyFaceFamilyFunctional RNAGene ExpressionGene FrequencyGene variantGeneral Transcription Factor GeneGeneral Transcription FactorsGenesGeneticGenetic DiversityGenetic ResearchGenetic ScreeningGenetic VariationGenetic studyGenomicsGoalsHead and NeckHead and neck structureHealth CareHeritabilityHumanIndividualInfanticideInformaticsInfrastructureInvestigatorsKnowledgeLipLip structureLiteratureLive BirthLogistic RegressionsMedicalMethodsMinorModern ManMolecularMolecular InteractionNewborn InfantNewbornsNoncoding RNANontranslated RNAPersonal SatisfactionPhenotypePopulationPremaxillary palatePrevalencePreventative strategyPreventionPrevention strategyPreventivePreventive strategyPrimary PalateQOLQuality of lifeReactive SiteRegulatory ElementResearchResearch PersonnelResearch ResourcesResearchersResourcesRisk-associated variantScreening procedureSecondary PalateStigmatizationTestingTherapeuticTranscription Factor Proto-OncogeneTranscription factor genesUnderrepresented GroupsUnderrepresented PopulationsUnited StatesUntranslated RNAVariantVariationWorkage 10 yearsallelic frequencyallelic variantcausationchromatin immunoprecipitation coupled with sequencingchromatin immunoprecipitation followed by sequencingchromatin immunoprecipitation with sequencingchromatin immunoprecipitation-seqchromatin immunoprecipitation-sequencingclinical translationclinically translatablecostcraniofacialcraniofacial tissuecraniofaciescritical perioddata basedevelopmentaldisease causationeffective interventionentire genomeenvironmental riskfacesfacialfull genomegenetic architecturegenetic variantgenome browsergenome sequencinggenomic varianthealth economicsimprovedinfancyinfantilelow-frequency mutationmouse genomemouse modelmultidisciplinarymurine modelnewborn childnewborn childrennoncodingoral cleftorofacial cleftorofacial cleftingorofacial developmentpsychologicpsychologicalrare allelerare mutationrare variantrisk allelerisk generisk genotyperisk locirisk locusrisk variantscreening toolssocial culturesocio-culturalsocio-economicsocio-economicallysocioculturalsocioeconomicallysocioeconomicsten year oldten years of agetraittranscription factorunder representation of groupsunder represented groupsunder represented peopleunder represented populationsunderrepresentation of groupsunderrepresented peoplewell-beingwellbeingwhole genome
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Full Description

PROJECT SUMMARY
Orofacial clefts (OFCs) are the most common birth defects affecting the head and neck. Families with OFCs

face significant financial, educational, medical, psychological, and cultural challenges, including instances of

infanticide due to stigmatization and a lack of sociocultural support. This proposal focuses on two key aims: (1)

identifying craniofacial genes with rare non-synonymous deleterious variants, and (2) identifying craniofacial

enhancers with rare deleterious variants. By identifying rare deleterious variants in craniofacial genes and

enhancers, these aims will advance our understanding of the genetic and molecular mechanisms underlying

oral clefts (OFCs), significantly contributing to the improvement of treatment, prevention, and overall quality of

life for affected individuals and families.

Grant Number: 1R03DE035068-01
NIH Institute/Center: NIH

Principal Investigator: Azeez Butali

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