grant

Human normal tissue patient-derived organoids for pre-screening GI radiation countermeasure drugs

Organization COLUMBIA UNIVERSITY HEALTH SCIENCESLocation NEW YORK, UNITED STATESPosted 19 Aug 2025Deadline 31 Jul 2027
NIHUS FederalResearch GrantFY2025Active OxygenAcuteAcute Radiation SyndromeAffectAgeAgonistAnimal ModelAnimal Models and Related StudiesAnimalsApoptoticB cell differentiation factorB cell lymphoma 2B cell stimulating factor 2B-Cell CLL/Lymphoma 2 GeneB-Cell Differentiation FactorB-Cell Differentiation Factor-2B-Cell Stimulatory Factor-2B-cell lymphoma/leukemia-2BCDFBCL2BCL2 geneBSF-2BSF2Bcl-2BiopsyBody TissuesCanine SpeciesCanis familiarisCaringCell Communication and SignalingCell DeathCell SignalingCharacteristicsClinicalColony Stimulating Factor 3ComplementComplement ProteinsComplexCoupledDevelopmentDogsDogs MammalsDoseDrug usageDrugsDuodenumELISAEnzyme-Linked Immunosorbent AssayEpitheliumEthicsExposure toFDA approvedFemaleGastrointestinal InjuryGene ExpressionGenesGenetic PredispositionGenetic Predisposition to DiseaseGenetic SusceptibilityGenetic propensityGoalsGranulocyte Colony-Stimulating FactorHPGFHematopoieticHepatocyte-Stimulating FactorHumanHybridoma Growth FactorIFN-beta 2IFNB2IL-6IL6 ProteinIPO-BImmunoglobulin Enhancer-Binding ProteinIndividualIndophenol Oxidase BInherited PredispositionInherited SusceptibilityInhibition of ApoptosisInterleukin-6IntestinalIntestinesIntracellular Communication and SignalingIonizing Electromagnetic RadiationIonizing radiationLarge IntestineMGI-2MNSODManganese Superoxide DismutaseMeasuresMedicalMedicationMethodsMiceMice MammalsMitochondrial Superoxide DismutaseMn Superoxide DismutaseMn-SODModelingModern ManMolecular Mechanisms of ActionMorphologyMurineMusMyeloid Differentiation-Inducing ProteinNF-kBNF-kappa BNF-kappaBNFKBNHP modelsNormal TissueNormal tissue morphologyNuclear AccidentsNuclear Factor kappa BNuclear Transcription Factor NF-kBOrganOrganoidsOxygen RadicalsPathway interactionsPatientsPharmaceutical PreparationsPhysiologicPhysiologicalPlasmacytoma Growth FactorPluripoietinPro-OxidantsProtocolProtocols documentationProxyRNA SeqRNA sequencingRNAseqRT-PCRRadiationRadiation AccidentsRadiation DoseRadiation Dose UnitRadiation ToxicityRadiation induced damageRadiation-Ionizing TotalRadiotoxicityReactive Oxygen SpeciesReverse Transcriptase Polymerase Chain ReactionRoentgen RaysSOD2SOD2 geneSafetySamplingScreening procedureSignal TransductionSignal Transduction SystemsSignalingSmall IntestinesStandardizationSuperoxide Dismutase 2Survival AnalysesSurvival AnalysisSyndromeTIL3TLR5TLR5 geneTLR5 receptorTestingTimeTissue DonorsTissuesToll-Like Receptor 5Toll/Interleukin-1 Receptor-Like Protein 3Transcription Factor NF-kBTranslatingVariantVariationWorkX-RadiationX-Ray RadiationX-rayXrayabsorptionagesanti-oxidant enzymeantioxidant enzymebcl-2 Genesbiological sexbiological signal transductionbowelcanineced9 homologcomplementationcytokinedevelopmentaldomestic dogdrug detectiondrug testingdrug usedrug/agenteffectiveness testingefficacy studyefficacy testingenzyme linked immunoassayethicalgastrointestinalgenetic etiologygenetic mechanism of diseasegenetic vulnerabilitygenetically predisposedgranulocyte colony stimulating factorhemopoieticin vivointer-individual variabilityinter-individual variationinterestinterferon beta 2intestinal cryptionizing outputirradiation responsekappa B Enhancer Binding Proteinlarge bowelmalemass casualtymedical countermeasuremodel of animalnecrocytosisnon-human primatenonhuman primatenonhuman primate modelsnuclear disasternuclear eventnuclear factor kappa betanuclear incidentpathwaypersonalized screeningprecision screeningradiation countermeasureradiation damageradiation disasterradiation eventradiation incidentradiation mitigatorradiation poisoningradiation responseradiological accidentradiological countermeasureradiological disasterradiological eventradiological incidentradiological mitigatorradiomitigatorregenerativeresponseresponse to radiationreverse transcriptase PCRscreeningscreening toolsscreeningssexsmall boweltoll-5 receptortranscriptome sequencingtranscriptomic sequencingtumor
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Full Description

PROJECT SUMMARY/ABSTRACT
Exposure to high acute doses of ionizing radiation as a consequence of a radiological or nuclear event can cause

illnesses known collectively as acute radiation syndrome (ARS). No medical radiation countermeasure has been

approved as yet by the FDA to specifically counteract gastrointestinal (GI) ARS.

Radiomitigators efficacy studies cannot be conducted in humans for ethical reasons, thus the FDA requires these

tests in well-controlled animal studies. Two concerns however arise; first, the results obtained from animal

models do not always translate to humans: For instance, they may not reflect the inter-individual variability in the

human response to radiation damage due to factors such as age, sex, and genetic predisposition. Second, in-

vivo animal studies are laborious and expensive, and are not generally consistent with screening a large number

of drugs or drug variants. Thus, there is a need for alternate pre-screening models which are a) based on normal

human GI tissue and b) amenable to high-throughput pre-screening. To fill this gap, our goal is to develop and

validate the use of human normal tissue patient-derived organoids (NT-PDOs) established from healthy normal

tissue biopsies for pre-screening new candidate GI radiation countermeasures, and to assess the significance

of age and sex, in a high-throughput multi-well format.

In the context of GI ARS, NT-PDOs are an excellent extracorporeal model for the personalized screening of

radiomitigators. They stably replicate the morphological characteristics and physiological functions of the original

donor tissue, accurately reproduced the response of the human intestine to known toxic and nontoxic drugs, and

when exposed to ionizing radiation, cognate organoids had similar survival dose responses as small and large

intestinal crypts in mice. With two interrelated Aims, this proof-of-concept study aims at evaluating the feasibility

of using NT-PDOs as proxy of the native organ to test the efficacy/safety of new candidate radiomitigators before

advancing to more complex animal studies. To this end, efficacy of the test radiomitigator CBLB502 will be

evaluated in organoids derived from the small intestine of individuals of different ages and sex. In Aim 1,

effectiveness of the test radiomitigator will be assessed as organoid survival and viability dose-responses.

The mode of action of CBLB502 has been well characterized in animal models; the goal is to evaluate whether

the drug exerts similar functions in irradiated NT-PDOs. In Aim 2 for both sexes, the sample group identified in

Aim 1 with the combination of age, radiation dose, and time of administration of the drug after exposure that

shows the biggest effect on survival compared to respective sham-treated controls, will be analyzed using a

RNAseq approach coupled with RT-PCR of selected genes of interest.

The use of NT-PDOs to pre-screen medical countermeasures in a high-throughput multi-well format can

complement the animal in-vivo based strategy for the assessment of radiation countermeasures for GI ARS.

Grant Number: 1R21AI194022-01
NIH Institute/Center: NIH

Principal Investigator: Manuela Buonanno

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