grant

HIV-1 Gag Precursor Protein Interactions

Organization OREGON HEALTH & SCIENCE UNIVERSITYLocation PORTLAND, UNITED STATESPosted 1 Jun 2020Deadline 31 May 2026
NIHUS FederalResearch GrantFY2024AIDSAIDS VirusAIDS diagnosisAcquired Immune DeficiencyAcquired Immune Deficiency SyndromeAcquired Immune Deficiency Syndrome VirusAcquired Immunodeficiency SyndromeAcquired Immunodeficiency Syndrome VirusBindingBinding SitesBiochemicalC-terminalCell Communication and SignalingCell Membrane Lipid RaftsCell SignalingCell membraneCeramidesChaperoneCholesterolCollaborationsCombining SiteCytoplasmic DomainCytoplasmic MembraneCytoplasmic TailDefectDetergentsDevelopmentEnvelope ProteinEpidemicFosteringFoundationsFundingGenetic AlterationGenetic ChangeGenetic defectGlycoproteinsGoalsHIVHIV-1HIV-IHIV1Human Immunodeficiency Virus Type 1Human Immunodeficiency VirusesHuman immunodeficiency virus 1ImpairmentIntracellular Communication and SignalingIntracellular MembranesInvestigationLAV-HTLV-IIILigandsLipidsLymphadenopathy-Associated VirusMembraneMembrane MicrodomainsMethodsModelingMolecular ChaperonesMolecular ConfigurationMolecular ConformationMolecular InteractionMolecular StereochemistryMonitorMutationN-terminalNH2-terminalNon-Polyadenylated RNAPIP2PhosphatidesPhosphatidylinositol 4,5-BiphosphatePhosphatidylinositol 4,5-DiphosphatePhosphatidylinositol-4,5-BisphosphatePhospholipidsPlasma MembraneProtein PrecursorsProteinsPtIns 4,5-P2PtdInsP2RNARNA BindingRNA Gene ProductsRNA boundReactive SiteRetroviral Antigen gag ProteinRibonucleic AcidRoleSignal TransductionSignal Transduction SystemsSignalingSiteSphingolipid MicrodomainsSphingolipid-Cholesterol RaftsSphingomyelinsStructureVariantVariationViralViral gag ProteinsVirionVirusVirus AssemblyVirus ParticleVirus-HIVbiological signal transductioncell typeconformationconformationalconformational stateconformationallyconformationsdevelopmentalenv Antigensenv Gene Productsenv Polyproteinsenv Proteingag Antigensgag Gene Productsgag Polyproteinsgag Proteingenome mutationgroup specific antigeninsightintervention designlipid raftmembrane structuremutantmyristoylationnanobodiesnanobodynew approachesnovelnovel approachesnovel strategiesnovel strategyplasmalemmasdAbsingle domain antibodiessocial roletherapy designtraffickingtreatment designviral assembly
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Full Description

Despite great advances in AIDS diagnosis and treatment, the continuing AIDS epidemic demands
continuing efforts to understand all aspects of HIV replication and to develop new methods for its inhibition.

In pursuit of these goals, we have sought to define the activities and interactions of the HIV-1 structural

(Gag) proteins, with a specific focus on the N-terminal matrix (MA) domain. The Gag proteins initially are

synthesized as precursor Gag (PrGag) proteins that are myristoylated at the N-terminus of MA, and MA

domains target PrGag delivery to plasma membrane (PM) virus assembly sites virtue of preferential binding

to the signaling phospholipid phosphatidylinositol-4,5-bisphosphate (PI[4,5]P2). Evidence also indicates that

MA-RNA binding helps chaperone PrGag proteins to assembly sites, and that virus membranes are

enriched for lipid raft constituents such as cholesterol, sphingomyelin, and ceramide. In addition to its

trafficking role, MA has been shown to influence the incorporation of wild type (WT) HIV-1 envelope (Env)

glycoprotein trimers into virus particles. Previous investigations have shown that HIV-1 Env proteins that

carry cytoplasmic tail deletions (CT) in their transmembrane (TM; gp41) domains can be incorporated into

virions in a fashion that is cell type-dependent, but MA-independent. In contrast, MA mutations that impair

WT Env incorporation into virions have been identified. Moreover, other MA mutations have been shown to

suppress Env incorporation defects imposed either by MA mutations, or Env CT mutations. Such

observations imply that there could be direct MA-CT interactions, but proof has been lacking. During the

past funding period, we have made significant progress in understanding how MA and Env proteins interact.

We have shown that MA directly binds to Env CTs, and that binding depends on MA trimerization. We have

demonstrated that C-terminal amphipathic helices of HIV-1 Env CTs are involved in MA binding, and that

MA-CT binding is blocked by MA-RNA binding. We have discovered lipid composition changes that perturb

WT Env activity, and have obtained novel evidence of CT processing. Using this as a foundation, we

propose the characterization of MA-CT interactions and the roles of these interactions in HIV-1 replication.

In particular, we will define how Env proteins associate with MA trimers and lattices so as to determine how

WT Env proteins become incorporated into virus particles; and we will examine how Gag and Env proteins

collaborate in virus particles to perform their functions. Our results will help clarify how HIV Gag and Env

proteins cooperate, and will foster the development of novel approaches to interfere with HIV-1 replication.

Grant Number: 5R01AI152579-25
NIH Institute/Center: NIH

Principal Investigator: ERIC BARKLIS

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