grant

Germline transmission of epigenetic alterations to offspring

Organization UNIVERSITY OF MISSOURI-COLUMBIALocation COLUMBIA, UNITED STATESPosted 1 Aug 2023Deadline 30 Nov 2026
NIHUS FederalResearch GrantFY202520 year old20 years of age21+ years oldAdultAdult HumanAgeAndrogen ReceptorAnimal ModelAnimal Models and Related StudiesBS-seqBisulfite-based sequencingBody TissuesCRISPRCRISPR/Cas systemChemical ExposureChemicalsClustered Regularly Interspaced Short Palindromic RepeatsCpG IslandsCpG-Rich IslandsCrossbreedingDNADNA MethylationData BasesDatabasesDefectDeoxyribonucleic AcidDevelopmentDiseaseDisorderEmbryoEmbryonicEndocrine DisrupterEndocrine Disrupting ChemicalsEndocrine DisruptorsEndocrine disrupting agentEnvironmentEpigeneticEpigenetic ChangeEpigenetic MechanismEpigenetic ProcessEstrogenic AgentsEstrogenic CompoundsExposure toFailureFecundabilityFecundityFemaleFertilityFertilizationFishesFutureFuture GenerationsGametesGenderGenerationsGenetic HybridizationGerm CellsGerm LinesGerm-Line CellsGoalsGonadal structureHealthHereditaryHistologicHistologicallyHistoryHumanImpairmentIncidenceIndividualInheritedJapanese KillifishJapanese MedakaJapanese Rice FishLibrariesLifeLiteratureMammaliaMammalsMedaka KillifishMedakasMeiosisMitoticModelingModern ManModificationNon-Polyadenylated RNAOryzias latipesOryziinaeOutcomePartner in relationshipPatternPhenotypePredispositionPrimordial Germ CellPubertyPublishingR-Series Research ProjectsR01 MechanismR01 ProgramRNARNA Gene ProductsRecording of previous eventsReproductionReproductive CellsReproductive HealthResearchResearch GrantsResearch Project GrantsResearch ProjectsResistanceRibonucleic AcidRiskRoleSex CellSex MaturationSexual MaturationSiteSpermSpermatidsSpermatoblastsSpermatocytesSpermatogenesisSpermatogoniaSpermatophoresSpermatozoaSpermiocytesStructure of primordial sex cellSusceptibilityTestingTimeTissuesTransmissionVertebrate AnimalsVertebratesadult youthadulthoodage 20 yearsagesbisphenol Abisulfite sequencingbisulfite-seqcomparativedata basedevelopmentaldiet supplementdietary supplementsdiphenylolpropaneeggendocrine disrupting compoundentire genomeenvironmental chemicalepigeneticallyepigenomeepigenome editingepigenomic editingepitranscriptomeestrogenicfertilizationsfull genomegastrulationgenome scalegenome-widegenomewideglobal gene expressionglobal transcription profilegonadgonadshistone modificationhistoriesin vivoinitial cellinsightinterestlife historymalemale germ cellsmatemeioticmethylomemodel of animalneural cell bodyneuronal cell bodynext generationnutritional supplementoffspringprimary infertilityprogramspromoterpromotorpyrosequencingreproductivereproductive developmentresistantricefishsexsexual cellsocial rolesomasperm cellspermatogonespermatosporespermidspermigoniumspermoblastspermosporesubfertilitysuccesstooltraittranscriptometransmission processtwenty year oldtwenty years of agevertebratawhole genomeyoung adultyoung adult ageyoung adulthoodzoosperm
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Full Description

ABSTRACT: The overall goal of this research program is to delineate the role of germline
epigenetic alterations (epimutations) in the onset and progression of inter-and transgenerational

reproductive defects. So far, published scientific literature suggests that environmentally induced

epigenetic alterations, mainly DNA methylation, histone modifications, and RNA modifications

(epitranscriptome), are transmitted to subsequent generations via germline (eggs or sperm)1.

However, the role of observed epimutations in the development of reproductive phenotypes is not

well understood because of a lack of clear understanding of PGC to germline and germline-to

soma transfer of reprogramming-resistant epimutations during the turnover of generations. Here

in the proposed study, we are asking three big questions: a) Do germline epimutations establish

age and developmental stage specifically in males? b) Do ancestrally established

transgenerational epimutations predispose future generations to increased risks for reproductive

impairment if exposed again to emerging environmental chemicals of concern? c) Is the role of

the observed epimutations in the development of progression of phenotypic traits causative or

correlative? This R01 research project will systematically answer these questions in three different

aims. BPA will be used as a ubiquitous model endocrine-disrupting chemical (EDC), and

Bisphenol S (BPS) will be used as an emerging contaminant of concern, and medaka fish as a

comparative vertebrate animal model. Aim 1 will test the hypothesis that male germ cells at all

stages of development are susceptible to BPA, the model EDC. Aim 2 will test the hypothesis that

exposure of the F3 generation offspring with pre-existing epimutations to emerging contaminants

will result in an increased incidence of reproductive impairment. Aim 3 will test the hypothesis

that the EDC-induced epimutations are associated with reduced fertility in males and females and

that these epimutations can be corrected by reprogrammable CRISPR-dCas9 epigenome editing

in vivo. The project will identify footprints of the past exposure, determine the role of

epimutations in reproductive impairment, determine whether inherited epimutations predispose

current and future generations to increased risks of reproductive health due to exposure to

emerging contaminants of concern, and provide significant insights into mechanisms underlying

germline transmission of the epigenome and longitudinal health risks of exposure. Understanding

of key time points during which epimutations transfer would provide insights into strategies for

the mitigation of future estrogenic chemical-induced reproductive health effects in humans.

Grant Number: 5R01ES032452-05
NIH Institute/Center: NIH

Principal Investigator: Ramji Bhandari

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