grant

Epitranscriptomic control of ROS

Organization SUNY POLYTECHNIC INSTITUTELocation ALBANY, UNITED STATESPosted 24 Aug 2022Deadline 31 Jul 2026
NIHUS FederalResearch GrantFY20223-Selenylalanine3-selenyl-L-alanineAblationAbscissionActive OxygenAdoptedAgingAmino AcidsAutomobile DrivingBiochemicalBody TissuesCell BodyCell Communication and SignalingCell SignalingCellsChemopreventionChemopreventiveChemopreventive AgentCodonCodon NucleotidesDNA DamageDNA InjuryDataDefectDiploidDiploidyDiseaseDisorderEC 2.1.1.31-36EmbryoEmbryonicEnzyme GeneEnzymesEpigeneticEpigenetic ChangeEpigenetic MechanismEpigenetic ProcessEsteroproteasesExcisionExtirpationFamilyFibroblastsFree RadicalsGene ExpressionGene TranscriptionGenetic TranscriptionGenomic approachGrowth AgentsGrowth FactorGrowth SubstancesHot SpotHumanIMiDImmune modulatory therapeuticImmunomodulatorsIn VitroInflammatoryIntracellular Communication and SignalingKnock-outKnockoutLinkMaintenanceMeasuresMiceMice MammalsModelingModern ManModificationMolecularMonitorMurineMusNon-Polyadenylated RNAOncogenesisOrganOxidantsOxidation-ReductionOxidizing AgentsOxygen RadicalsPartner in relationshipPathologyPeptidasesPeptide HydrolasesPhenotypePlayPreventionPro-OxidantsProtease GeneProteasesProteinasesProteinsProteins Growth FactorsProteolytic EnzymesPublishingRNARNA ExpressionRNA Gene ProductsRNA MethylasesRNA, Transfer, MethyltransferasesReactive Oxygen SpeciesRedoxRegulationRemovalReporterRibonucleic AcidRoleSe elementSeleniumSelenocysteineSignal TransductionSignal Transduction SystemsSignalingStop CodonStressSurgical RemovalSystemT RNA MethyltransferasesTermination CodonTerminator CodonTestingTissuesTranscriptionTransfer RNATranslatingTranslation Stop SignalTranslationsTriplet Codon-Amino Acid AdaptorUrdUridineWorkaminoacidanti-carcinogenicanticarcinogenicbasebiological signal transductioncancer preventioncancer progressionchemoprevention agentcohortcytokinedrivingelectron acceptorepitranscriptomicsgene signaturesgenetic signaturegenomic effortgenomic strategyglutathione peroxidasegraduate studentimmune modulating agentsimmune modulating drugimmune modulating therapeuticsimmune modulatorsimmune modulatory agentsimmune modulatory drugsimmunomodulating agentsimmunomodulatory agentsimmunomodulatory drugsimmunomodulatory therapeuticsimprovedin vivoinsightknock-downknockdownmateneoplasm progressionneoplasticneoplastic progressionnew drug targetnew druggable targetnew pharmacotherapy targetnew therapeutic targetnew therapy targetnovel drug targetnovel druggable targetnovel pharmacotherapy targetnovel therapeutic targetnovel therapy targetoxidation reduction reactionphenotypic biomarkerphenotypic markerpreventpreventingprogramsresectionresponseselenoproteinsenescencesenescentsocial roletRNAtRNA Methyltransferasesthioredoxin reductasetransfer Ribonucleic acidstumor progressiontumorigenesisundergradundergraduateundergraduate student
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Full Description

Maintenance of the GSH redox cycle is reliant on the activities of selenocysteine-containing GSH
metabolizing enzymes which play fundamental roles in chemoprevention. Selenocysteine is the 21st

amino acid and does not contain a dedicated codon. Selenocysteine incorporation during translation

requires UGA-stop-codon recoding, which uses specifically modified tRNA for accurate decoding.

Dynamic changes in tRNA modification are an epitranscriptomic signal because they regulate gene

expression post-transcriptionally. We have shown that the stress-induced translation of many

selenocysteine containing ROS detoxifying enzymes is dependent on the Alkbh8 tRNA

methyltransferase. Alkbh8 enzymatically methylates the uridine wobble base on tRNASelenocysteine to

promote UGA-stop codon decoding. We have developed an Alkbh8 deficient mouse and have used

molecular, biochemical, and genomic approaches to demonstrate that Alkbh8Def mouse embryonic

fibroblasts (MEFs) and some organs display markers of senescence and a senescence gene signature.

Using human cells and our new Alkbh8Def/p16-3MR mice we propose to test the hypothesis that

senescence occurs in vitro and in vivo because of defective epitranscriptomic signals that

controls selenocysteine utilization. To achieve this two aims will: 1. determine if Alkbh8 and other

epitranscriptomic writers that limit selenocysteine utilization restrict the senescence program and 2.

determine if Alkbh8-deficiency drives senescence in vivo and whether senescence ablation accelerates

or tempers pathologies that accompany selenoprotein loss. Our proposal is being submitted with

significant preliminary data supporting the idea that Alkbh8 and epitranscriptomic signals are key to

chemoprevention by limiting senescent activity.

Grant Number: 1R15CA274603-01
NIH Institute/Center: NIH

Principal Investigator: Michael Carpenter

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