grant

Elucidating the Mechanisms of S. aureus Motility in Bone and Developing Interventions

Organization UNIVERSITY OF ROCHESTERLocation ROCHESTER, UNITED STATESPosted 20 Sept 2017Deadline 31 Aug 2027
NIHUS FederalResearch GrantFY20253-D print3-D printer3D Print3D printer3D printingAdhesionsAdjuvantAntibiotic AgentsAntibiotic DrugsAntibiotic TherapyAntibiotic TreatmentAntibioticsAntimicrobial ResistanceArthroplastyBacteriaBacterial AdhesinsBiological FunctionBiological ProcessBone InfectionCandidate Disease GeneCandidate GeneCell WallCell divisionCenter for Translational Science ActivitiesChemicalsChronicClinicalCommunitiesCuesDiseaseDisorderDoseFemurFundingGene Action RegulationGene ExpressionGene Expression RegulationGene RegulationGene Regulation ProcessGenesGenetic DeterminismGenomicsHigh Throughput AssayHospitalsImmune EvasionImplantIn VitroInfectionInterventionInvadedJoint Prosthesis ImplantationLibrariesLocal TherapyLocalized TherapyLong-term infectionMRSAMembraneMethicillin Resistant S. AureusMethodsMiceMice MammalsMicrofluidicsMinimum Inhibitory Concentration measurementMinimum Inhibitory ConcentrationsMiscellaneous AntibioticModelingMolecularMolecular GeneticsMotilityMureinMurineMusMusculoskeletalOperative ProceduresOperative Surgical ProceduresOsteocytesOsteomyelitisOutcomePMMAPathway interactionsPatientsPenicillin Binding Protein 4PeptidoglycanPeptidyl TransferasesPeptidyl TranslocasesPeptidyltransferasePoly(methyl methacrylate)Polymethyl MethacrylatePolymethylmetacrylatePolymethylmethacrylatePredispositionProcessProphylactic treatmentProphylaxisProteinsRNA SeqRNA sequencingRNAseqRecurrenceRecurrentRefractoryReplacement ArthroplastyRodRoleS aureusS. aureusS. aureus infectionSYS-TXSecond LookSecond Look SurgeryShapesSi elementSiliconSpecificityStaph aureusStaph aureus infectionStaphylococcus aureusStaphylococcus aureus infectionSurfaceSurgicalSurgical InterventionsSurgical ProcedureSurgical RevisionSusceptibilitySystemic TherapyTechniquesTestingTherapeuticTranslationsTranspeptidasesVancomycinWorkadhesinanti-microbial resistantantibiotic tolerancebacterial disease treatmentbacterial infectious disease treatmentbonebone healingbone wound healingcellular targetingchip modelchip systemchronic infectioncompact bonecomputer chipcortical bonecostdesigndesigningefficacy validationgenetic determinanthigh throughput screeningimmune evasivein vivoinfected with S. aureusinfected with Staph aureusinfected with Staphylococcus aureusinfection recurrenceinhibitorjoint arthroplastyjoint replacementmembrane structuremethicillin resistance Staphylococcus aureusmethicillin resistant Staphylococcus aureusmethicillin resistant strains of Staphylococcus aureusmicrobialmicrochipmigrationmouse modelmurine modelmutantnano-membranenanomembranenew therapeutic approachnew therapeutic interventionnew therapeutic strategiesnew therapy approachesnew treatment approachnew treatment strategynovelnovel therapeutic approachnovel therapeutic interventionnovel therapeutic strategiesnovel therapy approachon a chipon chiposseous wound healingosteoimmunologypathwaypersistent infectionprogramsrecurrent infectionrecurring infectionresistance mechanismresistance to anti-microbialresistant mechanismresistant to antimicrobialresponsescaffoldscaffoldingscreeningscreeningssmall molecular inhibitorsmall moleculesmall molecule inhibitorsocial rolesub micronsubmicronsurgerytherapeutic candidatethree dimensional printingtolerance to antibioticstolerate antibioticstranscriptome sequencingtranscriptomic sequencingtranslationtranslational impacttranslational research centertranslational sciences centervalidate efficacyµfluidic
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Full Description

Staphylococcus aureus is involved in 80% of all musculoskeletal infections (MSKI) costing $17,000–$150,000
per patient. Approximately 50% of these infections are caused by methicillin-resistant S. aureus (MRSA)

acquired in both hospital and community. With >1.5 million total joint replacements (TJR) performed each

year, the most rigorous prophylaxis and aseptic surgical techniques cannot reduce osteomyelitis (OM) rates

below 0.5%–2%. Treating established MSKI remains extremely challenging, with current rates of recurrent or

persistent infection following revision surgery still as high as 33%. The persistence of S. aureus infection is

attributed to its arsenal of immune evasion and antimicrobial resistance mechanisms. Despite great efforts to

develop solutions, treatment paradigms have not improved the poor clinical outcomes for OM patients over the

last four decades. However, our CoRTOBI paradigm-shifting discovery of S. aureus colonization of the

osteocyte lacuno-canalicular network (OLCN) of live cortical bone during OM in mice and patients may explain

why previous approaches for treating recurring bone infections have failed, and provide a new therapeutic

strategy for eliminating chronic OM. It also begs important questions about the mechanisms that: 1) enable

spherical S. aureus to deform into submicron-rod shaped bacteria to invade the OLCN, and 2) render

susceptible S. aureus strains refractory to antibiotics after OLCN invasion. Over the past four years we

developed a novel bone infection-on-chip utilizing silicon nanomembrane with submicron (~500 nm) array of

pores to simulate OLCN orifices (µSiM-CA). By targeted deletion of candidate genes, we identified cell wall

transpeptidase proteins, penicillin binding protein 4 (Pbp4), as essential for S. aureus propagation through

submicron channels of the µSiM-CA chips in vitro and then demonstrated that they inhibit OLCN colonization in

vivo. Moreover, we developed and performed a high throughput screening campaign to identify PBP4 inhibitors

(iPBP4). In this renewal, we will first demonstrate the efficacy of PBP4 small molecule inhibitors (iPBP4) in

abrogating the OLCN invasion in mouse models of osteomyelitis. We will then identify targets for OM therapy

based on gene expression changes that affords S. aureus adaptive tolerance to antibiotics in a novel µSiM-

OLCN Chip platform. Finally, we will test the premise that OLCN colonization likely involves many additional

factors other than PBP4, and that other chemical classes of OLCN colonization inhibitors can be identified by

empirically defining the genetic determinants. These potential targets can then be used to identify

corresponding putative therapeutics in a single screening approach. At the completion of this renewal program,

CoRTOBI will have: 1) validated recently discovered iPBP4 candidates and potentially new PBP-independent

hits against OLCN colonization, 2) a molecular genetic understanding of S. aureus refractory response to

antibiotics following OLCN colonization, and 3) translational methods for iPBP4 impregnated 3D-printed

scaffolds in one-stage revision surgery for bone infections.

Grant Number: 5P50AR072000-09
NIH Institute/Center: NIH

Principal Investigator: Hani Awad

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