grant

Effect of Mutant HTT on the Development and Maturation of Astrocytes

Organization UNIVERSITY OF CALIFORNIA-IRVINELocation IRVINE, UNITED STATESPosted 1 Sept 2024Deadline 31 Aug 2026
NIHUS FederalResearch GrantFY202521+ years oldATF-3ATF3AddressAdultAdult HumanAntioxidantsAssayAstrocytesAstrocytusAstrogliaAttentionAutomobile DrivingAutoregulationBackBasal GangliaBasal NucleiBasal Transcription FactorBasal transcription factor genesBioassayBioinformaticsBiological AssayBlood - brain barrier anatomyBlood-Brain BarrierBody TissuesBrainBrain Nervous SystemCAG repeatCAG trinucleotide repeatCell BodyCell CommunicationCell Communication and SignalingCell FunctionCell InteractionCell MaturationCell NucleusCell PhysiologyCell ProcessCell SignalingCell modelCell-to-Cell InteractionCellsCellular FunctionCellular PhysiologyCellular ProcessCellular modelCognitionCommunicationCommunitiesCorpus StriatumCorpus striatum structureDataData AnalysesData AnalysisData SetDegenerative Neurologic DisordersDependenceDevelopmentDevelopmental GeneDevelopmental ProcessDiathesisDiseaseDisease ProgressionDisease susceptibilityDisorderDorsumDown-RegulationEncephalonEnvironmentExonsGLASTGLAST ProteinGene ProteinsGene TranscriptionGeneral Transcription Factor GeneGeneral Transcription FactorsGeneralized GrowthGenesGeneticGenetic TranscriptionGlutamate-Aspartate TransporterGlutamatesGrowthHD GeneHD proteinHemato-Encephalic BarrierHereditaryHeterogeneityHomeostasisHuntingtinHuntingtin ProteinHuntington ChoreaHuntington DiseaseHuntington geneHuntington proteinHuntington'sHuntington's DiseaseHuntington's disease gene productHuntingtons DiseaseIGF1IGF1 geneIGFIIT15 geneImpairmentIn VitroIndividualInheritedIntracellular Communication and SignalingInvestigationIonsKnowledgeL-GlutamateLaboratoriesLifeLigandsLiteratureMapsMentorshipMessenger RNAMiceMice MammalsMolecularMorphologyMovementMurineMusMutateNerve CellsNerve DegenerationNerve Transmitter SubstancesNerve UnitNervous System Degenerative DiseasesNeural CellNeural Degenerative DiseasesNeural DevelopmentNeural degenerative DisordersNeurocyteNeurodegenerative DiseasesNeurodegenerative DisordersNeurodevelopmental DeficitNeurologic Degenerative ConditionsNeuron DegenerationNeuronsNeurotransmittersNon-Polyadenylated RNANucleusOutcome MeasurePaintPathologicPathologyPathway interactionsPatientsPersonal SatisfactionPersonalityPhenotypePhysiological HomeostasisPoly QPredispositionProbabilistic ModelsProbability ModelsProcessProtein Gene ProductsProteinsRNARNA ExpressionRNA Gene ProductsReceptor ProteinRegional DiseaseResearchResearch ResourcesResolutionResourcesRibonucleic AcidRoleScientistSignal PathwaySignal TransductionSignal Transduction SystemsSignalingSingle-Nucleus SequencingStatistical ModelsStressStriate BodyStriatumSubcellular ProcessSurvey InstrumentSurveysSusceptibilityT cell factor 4T cell transcription factor 4T-Cell-Specific Transcription Factor 4TCF-4TCF4TCF7L2TCF7L2 geneTcf4 transcription factorTcf712 transcription factorTestingTherapeutic InterventionTimeTissue GrowthTissuesTranscriptionTranscription Factor 7-Like 2Transcription Factor Proto-OncogeneTranscription factor genesWorkactivating transcription factor 3adulthoodastrocytic gliabio-informatics toolbioinformatics toolbiological signal transductionbloodbrain barrierbody movementbrain atrophybrain cellcell typecerebral atrophycortical atrophydata integrationdata interpretationdegenerative diseases of motor and sensory neuronsdegenerative neurological diseasesdevelopmentaldrivingdriving forcefunctional improvementfunctional outcomesglutamatergichuman diseaseiPSiPSCiPSCsimprove functionimprovedimproved functional outcomesinduced pluripotent cellinduced pluripotent stem cellinduced pluripotent stem cells derived from patientsinduced pluripotent stem cells from patientsinducible pluripotent cellinducible pluripotent stem cellinnovateinnovationinnovativeinsightinterestinteresting transcript 15intervention therapyknock-downknockdownlater in lifelater lifeliability to diseasemRNAmeasurable outcomemitochondrial metabolismmouse modelmurine modelmutantneural degenerationneurodegenerationneurodegenerativeneurodegenerative illnessneurodevelopmentneurological degenerationneuronalneuronal degenerationneuropathologicneuropathologicalneuropathologyneurotransmitter metabolismnovelontogenyoutcome measurementoverexpressoverexpressionpathwaypatient derived human iPSpatient derived human iPSCpatient derived human induced pluripotent stem cellpatient derived iPSpatient derived iPSCpatient derived induced pluripotent cellspatient derived induced pluripotent stem cellspatient-derived pluripotent stem cellspolyQpolyglutaminepostnatalreceptorresolutionsresponsesNuc-Seqsingle nucleus RNA-sequencingsingle nucleus seqsingle-nucleus RNA-seqskillssnRNA sequencingsnRNA-seqsocial rolespatial RNA sequencingspatial and temporalspatial gene expression analysisspatial gene expression profilingspatial integrationspatial resolved transcriptome sequencingspatial temporalspatial transcriptome analysisspatial transcriptome profilingspatial transcriptome sequencingspatial transcriptomicsspatially resolved transcriptomicsspatio transcriptomicsspatiotemporalstatistical linear mixed modelsstatistical linear modelsstressorstriataltherapeutic targettranscription factortranscriptomicstranslation strategytranslational approachtranslational strategyuptakewell-beingwellbeing
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Full Description

Project Summary / Abstract:
Astrocytes are known to be dysfunctional in Huntington’s disease (HD); however, further research is needed

to understand how these star-like cells develop in the context of HD. HD is a devastating, progressive, genetic

neurodegenerative disease, and recent work suggests mutant Huntingtin (mHTT), the cause of disease, may

trigger early molecular and cellular changes during neurodevelopment that sets up susceptibility. Data suggests

mHTT impacts the maturation of neural cells into adult life and throughout disease progression. While HD is

primarily characterized by the degeneration of medium spiny neurons in the striatum and atrophy of the cortex,

astrocytes have become a prominent cell type of interest as a contributor to the onset and progression of the

disease. Astrocytes guard and support the brain by stabilizing the blood-brain barrier, responding to stressors,

and regulating ions and neurotransmitter homeostasis, all of which are dysregulated in HD. Our lab at UC Irvine

has shown developmental deficits using single-nuclei RNA sequencing (snRNAseq) in HD human induced PSC-

derived astrocytes (iAstros) and in rapidly progressing R6/2 HD mouse cortex and striatum. We also confirmed

that HD iAstros have decreased RNA and protein of transcription factors (TFs) SOX9 and ATF3, results that

support a role for these TFs in dysregulated maturation and developmental pathways. Lacking in the snRNAseq

from mice is spatial information, thus I conducted spatial transcriptomics of postnatal day 0 (P0), 4-week and 12-

week-old control and R6/2 mice and found early dysregulation of astrocytic developmental genes and a possible

role for neuronal-derived signaling factors in astrocyte developmental impairment. Several questions remain: 1)

whether HD astrocyte dysmaturation is an initial delay of maturation or a persistent impairment, 2) what is

mechanistically driving spatial maturation impairments, and 3) what the impact is of astrocyte deficits on

neighboring cells. I hypothesize that early impairments in astrocyte maturation set up susceptibility to HD

progression later in life. To begin to address these gaps in knowledge, in Aim 1, I will investigate the role of

dysregulated TFs, SOX9 and ATF3, with overexpression and knockdown in iAstros and assess cellular

maturation, function, morphology, and transcriptomic pathways. Aim 2 then utilizes the spatial transcriptomics

data integrated with snRNAseq to evaluate temporal and spatial regulators of regional changes with a focus on

astrocyte development and maturation, and the contributions of neuronal-astrocyte signaling. I will infer cellular

communication between neurons and astrocytes through ligand-receptor analysis and functionally validate my

preliminary findings in vitro with iAstros. This proposal uses innovative approaches to provide the scientific

community with a novel investigation of dysfunctional astrocytic developmental trajectories in HD with the aim of

influencing early therapeutic interventions to impact the onset or progression of disease. My laboratory

environment at UCI and individualized mentorship from my sponsors supporting my research skills in perturbing

in vitro cell models and bioinformatics analysis will help to burgeon my growth as a young scientist.

Grant Number: 5F31NS134306-02
NIH Institute/Center: NIH

Principal Investigator: Mara Burns

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