grant

Developmental regulation of epithelial polarization by pre-mRNA splicing

Organization DUKE UNIVERSITYLocation DURHAM, UNITED STATESPosted 1 Feb 2023Deadline 30 Nov 2026
NIHUS FederalResearch GrantFY2026ATP Dependent Proton TranslocaseATP phosphohydrolase (H+-transporting)Adenosine Triphosphatase ComplexAffectAlimentary CanalAmino AcidsApicalAutomobile DrivingAutoregulationBiologicalBrachydanio rerioCancersCell PolarityClathrin AdaptorsClathrin Assembly ProteinsClathrin-Associated AdaptorsClathrin-Associated ProteinsComplexDNA mutationDanio rerioDataDefectDegradation PathwayDegradative PathwayDependenceDevelopmentDiarrheaDietary ProteinsDigestionDigestive TractDiseaseDisorderEndocytosisEndosomesEnterocytesEpithelial CellsEpitheliumF(0)F(1)-ATP SynthaseF(1)F(0)-ATPaseF0F1 ATPaseF1F0 ATPase ComplexFoodGI TractGP80-LNGFRGastrointestinal TractGastrointestinal tract structureGenesGeneticGenetic ChangeGenetic ScreeningGenetic defectGenetic mutationGlycansGoalsGolgiGolgi ApparatusGolgi ComplexH(+)-ATPaseH(+)-Transporting ATP SynthaseH(+)-Transporting ATPaseH(+)ATPase ComplexH+-Translocating ATPaseHomeostasisINCO receptorImpairmentIntervening SequencesIntestinalIntestinal AbsorptionIntestinesIntronsIon ChannelIonic ChannelsLipidsLow-Affinity Nerve Growth Factor ReceptorLysosomesMalabsorption SyndromesMalignant NeoplasmsMalignant TumorMembrane ChannelsMembrane Protein GeneMembrane ProteinsMembrane TransportMembrane Transport ProteinsMembrane TransportersMembrane-Associated ProteinsMetabolic GlycosylationModelingMorphologyMucinsMucus GlycoproteinMutationNGF ReceptorNGFR ProteinNerve Growth Factor ReceptorNerve Growth Factor Receptor p75Neurotropin Receptor p75NutrientPathway interactionsPhysiologicPhysiologicalPhysiological HomeostasisPhysiologyPlayPolysaccharidesPre-mRNAProcessProtein GlycosylationProtein SortingsProteinsProton-Translocating ATPase ComplexesProton-Translocating ATPasesRNA SeqRNA SplicingRNA sequencingRNA, Messenger, PrecursorsRNAseqReceptor ProteinReceptosomesRegulationRoleSortingSplicingSurfaceSurface ProteinsSystemSystemic diseaseTestingTranscriptTransmembrane TransportV-ATPaseV-type ATPaseVacuoleVisualZebra DanioZebra FishZebrafishabsorptionalimentary tractaminoacidapical membranebasolateral membranebiologicbowelcellular polaritycubilincubulindevelopmentaldigestive canaldrivingfluorescence imagingfluorescent imagingforward geneticsgastrointestinal absorptiongastrointestinal absorption disordergenome mutationglycosylationgp75 NGFRhydrogen transporting ATP synthaseimprovedin vivointestinal epitheliumintestinal malabsorptionintestinal maturationintrinsic factor-cobalamin receptormRNA Precursormalabsorptionmalignancymitochondrial ATPasemutantneoplasm/cancernutrient absorptionorgan developmentorgan growthp75p75 neurotrophin receptorp75 transcription factorp75NTRparticlepathwaypublic health relevancereceptorsegregationsocial rolesugarsuperresolution microscopytraffickingtranscriptional coactivator p75transcriptome sequencingtranscriptomic sequencinguptakevacuolar ATPasevacuolar H+-ATPasevacuolar membrane H(+)-ATPasevitamin B12-intrinsic factor receptor
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Full Description

Abstract
The apical membrane of epithelial cells in the intestine play critical roles in physiology and homeostasis. Many

specialized functions of intestinal epithelial cells, such as nutrient absorption, depend on faithfully sorting proteins

to the apical membrane during biosynthetic delivery. However, the cellular mechanisms driving apical membrane

protein sorting and how it matures during development are poorly defined. Also unknown is what controls the

onset of apical endocytosis in Lysosome Rich Enterocytes (LREs). To discover mechanisms of apical membrane

polarization in vivo, we performed a forward genetics screen for factors required for sorting of a model apical

cargo (O-glycan-GFP, Og-GFP) in the zebrafish intestine. We isolated distinct classes of mutants affecting apical

Og-GFP sorting. Our preliminary data has uncovered a pH-dependent mechanism for sorting membrane proteins

in subapical endosomes either to the degradative pathway or to the apical membrane. We also discovered a role

for regulated pre-mRNA intron splicing in activating apical membrane transport pathways crucial for polarized

protein delivery in enterocytes and for apical endocytosis in LREs of the developing intestine. Our studies will

uncover genetic and cellular mechanisms crucial for the maturation of a fully polarized and physiologically active

epithelium in the vertebrate gut.

Grant Number: 5R01DK132120-04
NIH Institute/Center: NIH

Principal Investigator: Michel Bagnat

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