grant

Development of human taste organoid models

Organization UNIVERSITY OF COLORADO DENVERLocation Aurora, UNITED STATESPosted 1 Aug 2024Deadline 31 Jul 2026
NIHUS FederalResearch GrantFY20242019 novel corona virus2019 novel coronavirus2019-nCoV21+ years oldAccelerationAdultAdult HumanAffectAnti-Cancer AgentsAntineoplastic AgentsAntineoplastic DrugsAntineoplasticsAutopsyAutoregulationBio-InformaticsBioinformaticsBiopsyBody TissuesCOVID-19COVID-19 virusCOVID19 virusCV-19Cancer DrugCancer TreatmentCancersCell BodyCell LineCellLineCellsCoV-2CoV2CollectionColonCoronavirus Infectious Disease 2019Culture MediaData SetDerivationDerivation procedureDetectionDevelopmentDiameterDiseaseDisorderDissociationDistorted TasteDrugsDysfunctionDysgeusiaEatingEpithelial CellsEpitheliumExpression SignatureFeedbackFemaleFood IntakeFreezingFunctional disorderGene ExpressionGene Expression ProfileGenesGoalsGrantGustationHarvestHistologicHistologicallyHomeostasisHost FactorHost Factor ProteinHumanImmunofluorescenceImmunofluorescence ImmunologicIn Situ HybridizationIndividualIngestionIntegration Host FactorsIntestinalIntestinesLifeLungLung Respiratory SystemMalignant Neoplasm TherapyMalignant Neoplasm TreatmentMalignant NeoplasmsMalignant TumorMediatingMedicationMesenchymasMesenchymeMessenger RNAMethodsMiceMice MammalsModelingModern ManMolecularMothsMurineMusNGS MethodNGS systemNatural regenerationNeoplastic Disease Chemotherapeutic AgentsOrganOrgan DonorOrgan ProcurementsOrganoidsPancreasPancreaticParageusiaPathologyPatientsPharmaceutical PreparationsPhysiological HomeostasisPhysiopathologyPopulationProcessProductionProgenitor CellsPropertyProtocolProtocols documentationQuantitative RTPCRQuantitative Reverse Transcriptase PCRReactionReceptor CellRegenerationResearch DesignResource SharingSARS corona virus 2SARS-CO-V2SARS-COVID-2SARS-CoV-2SARS-CoV2SARS-associated corona virus 2SARS-associated coronavirus 2SARS-coronavirus-2SARS-related corona virus 2SARS-related coronavirus 2SARSCoV2SamplingSensorySerial PassageSevere Acute Respiratory Coronavirus 2Severe Acute Respiratory Distress Syndrome CoV 2Severe Acute Respiratory Distress Syndrome Corona Virus 2Severe Acute Respiratory Distress Syndrome Coronavirus 2Severe Acute Respiratory Syndrome CoV 2Severe Acute Respiratory Syndrome-associated coronavirus 2Severe Acute Respiratory Syndrome-related coronavirus 2Severe acute respiratory syndrome associated corona virus 2Severe acute respiratory syndrome coronavirus 2Severe acute respiratory syndrome related corona virus 2Sodium ChlorideStrains Cell LinesStudy TypeSurgeonTasteTaste Bud CellTaste BudsTaste PerceptionTechnologyTissue Culture TechniquesTissue DonorsTissue ModelTissue ProcurementsTissue SampleTissuesTongueTumor-Specific Treatment AgentsViral DiseasesVirus DiseasesWorkWuhan coronavirusadult progenitoradult stem celladulthoodanti-cancer druganti-cancer therapybowelcancer therapycancer-directed therapycell immortalizationcell transductioncellular transductioncoronavirus disease 2019coronavirus disease 2019 viruscoronavirus disease-19coronavirus disease-19 viruscoronavirus infectious disease-19cultured cell linedensitydevelopmentaldifferential expressiondifferentially expresseddrug/agentfightinggene expression patterngene expression signaturegrowth mediagustatory perceptiongustatory processinggustatory responsegustatory systemhCoV19healthy volunteerhuman femalehuman modelhuman tissuein situ Hybridization Geneticsin situ Hybridization Staining Methodin vitro Modelingestinjury responseinjury to the intestinesintestinal injurymRNAmalemalignancymedically necessarymedically necessary caremodel of humannCoV2necropsyneoplasm/cancernext gen sequencingnext generation sequencingnextgen sequencingpapillapathogenpathophysiologypostmortemprogenitor cell markersprogenitor cell populationprogenitor markersprogenitor populationprogenitor stem cell markerspulmonaryqRTPCRregenerateresponse to injurysaltscRNA-seqsingle cell RNA-seqsingle cell RNAseqsingle cell expression profilingsingle cell transcriptomic profilingsingle-cell RNA sequencingskillssomatic progenitorsomatic stem cellstem and progenitor cell populationstem cell biomarkersstem cell markersstem cell populationstem cellsstudy designtaste processingtaste receptortaste responsetaste systemtongue papillatranscriptional differencestranscriptional profiletranscriptional signaturetransduced cellsviral infectionvirus infectionvirus-induced disease
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Full Description

The sense of taste is mediated by taste buds on the tongue. Each bud is a heterogeneous collection of taste
receptor cells (TRCs), and all TRCs, which transduce sweet, bitter, salt, sour and umami tastes, are continually

renewed from adult stem cells outside of taste buds. However, taste function can be perturbed by numerous

insults, including drugs and viral infection that affect TRC renewal.

Ex vivo organoids are now a conventional method for study of cellular and molecular mechanisms of adult

epithelial homeostasis, e.g., intestine. We and others have recently established this technology for the taste

system, where isolated stem cells from the circumvallate taste papilla (CVP) of adult mice are cultured to

generate TRC-containing lingual organoids; this model is used increasingly to study the impact of drugs and

pathogens on taste homeostasis. While informative, however, results in mice may not precisely reflect how

taste is perturbed in patients. Therefore, here we proposed to establish human TRC-replete lingual organoid

lines from CVPs obtained postmortem from organ donors as a first step in developing human in vitro models.

Our strategy overcomes several logistical and technical barriers to production of lingual organoids in

humans. 1. We now have a pipeline to obtain CVP biopsies through a non-profit organ and tissue procurement

organization. 2. We are expert at mouse lingual organoids and will apply our skill to human tissue. 3. We will

work closely with our Organoid and Tissue Modelling Core, who have already created organoid lines from

human postmortem donor pancreas and intestine.

Aim 1. Validate and characterize CVP samples in male and female human donor tissue. Humans have

multiple, easily visible CVPs. Initially, PSR staff will process harvested biopsies to verify CVPs are reliably

obtained. Subsequently, TRC and stem cell marker gene expression will be assessed via q-PCR, in situ

hybridization (ISH) and/or immunofluorescence (IF). We will perform single cell RNA-sequencing (scRNA-

seq) of fresh male and female biopsies to transcriptionally profile CVP epithelial cell populations, identify

differentially expressed genes in human TRCs and stem cells, and construct lineage models.

Aim 2. Establish human lingual organoids from CVP biopsies. Initially, small tissue pieces of CVPs will be

cultured under our mouse lingual organoid protocol. Organoids will be assessed for TRC and stem cell marker

gene expression via qPCR, ISH and IF as in Aim 1. The organoid protocol will be modified as necessary;

permutations may include differences in treatment of starting material, plating density, culture media

components, and duration of culture. Once TRC-replete organoids are produced reliably, organoid lines from

at least 2 female and 2 male donors will be maintained through serial passage and storage of frozen stocks.

Additionally, we will perform scRNA-seq of 1 male and 1 female organoid line for bioinformatic comparison

with CVP datasets obtained in Aim 1.

Grant Number: 1R21DC022075-01
NIH Institute/Center: NIH

Principal Investigator: Linda Barlow

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