grant

Data-Analysis-Core

Organization UNIVERSITY OF PITTSBURGH AT PITTSBURGHLocation PITTSBURGH, UNITED STATESPosted 30 Sept 2021Deadline 31 Aug 2026
NIHUS FederalResearch GrantFY20253-D modeling3D modelingAI algorithmAgreementAssayAtlasesBioassayBioinformaticsBiologicalBiological AssayBiological MarkersBiometricsBiometryBiostatisticsBody TissuesCell AgingCell BodyCell SenescenceCellsCellular AgingCellular SenescenceClinical SciencesCollaborationsComputational BiologyDataData AnalysesData AnalysisData Base ManagementData Base Management SystemsData BasesData CollectionData Coordinating CenterData Coordination CenterData SetDatabase Management SystemsDatabasesDoctor of PhilosophyElementsEnsureGoalsHealth SciencesHeartHumanImageInformaticsInstitutionLungLung Respiratory SystemMachine LearningMapsMedical centerMethodsModelingModern ManMultiomic DataOhioPh.D.PhDProceduresProcessPublic HealthQuality ControlReplicative SenescenceResearchResource SharingSystemTissue atlasTissuesTranslational ResearchTranslational ScienceUniversitiesValidationWorkartificial intelligence algorithmassociate facultyassociate professorbio-markersbiologicbiologic markerbiomarkerbiomed informaticsbiomedical informaticscomputational intelligencecomputational pipelinescomputer biologycomputer sciencedata analysis coredata analysis research coredata analytics coredata analytics research coredata basedata harmonizationdata integritydata interpretationdata qualitydata standardizationdata standardsdatabase managementdatabase systemsdesigndesigningexperienceharmonized dataimage-based methodimagingimaging methodimaging modalitymachine based learningmetadata standardsmid-career facultymidcareer facultymultiple omic dataopen dataopen scienceopen-source dataprofessorprogramsquality assurancerelational database management systemsreplicative agingsenescencesenescentsynergismthree-dimensional modelingtissue maptissue mappingtranslation researchtranslational investigationvalidations
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Full Description

ABSTRACT
Data Analysis Core. The Data Analysis Core (DA) will construct biomarker and map datasets generated from

whole human lung and heart tissue, cells, and tissue-based 3D models. The DAC will deliver robust and

standardized data to the TriState SenNet TMC and the SenNet Data Coordinating Center (CODCC). The overall

goals of the DAC are to store, analyze, and model the biomarker and map datasets generated from the tissues

provided by the Biospecimen Core (BC) and analyzed by the Biological Analysis Core (BAC) using robust

computational packages and analysis methods, align with data from the BC, and work together with other TMCs

and the CODCC to develop network-wide open data and metadata standards, and to conduct cross-validation

of assays within and across TMCs. We will achieve these goals by: 1) providing biostatistics and informatics

support to ensure the integrity of data collection, storage, transfer, and harmonization within the TriState SenNet

TMC; 2) constructing a lung and heart senescence atlas using advanced and robust statistical, computational,

and artificial intelligence algorithms; and 3) collaborating closely with the CODCC and other TMCs on developing

open data and metadata standards and cross-validating assays within and across TMCs.

Grant Number: 5U54AG075931-05
NIH Institute/Center: NIH

Principal Investigator: Ziv Bar-Joseph

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