grant

Core mechanisms that contribute to inhibition of wound healing in diabetic foot and venous leg ulcers

Organization UNIVERSITY OF MIAMI SCHOOL OF MEDICINELocation CORAL GABLES, UNITED STATESPosted 1 Jun 2022Deadline 31 May 2027
NIHUS FederalResearch GrantFY20252,3,7,8-Tetrachlorodibenzo-p-dioxin ReceptorsAH ReceptorsAPRF proteinAcute-Phase Response FactorAffectAmputationAnimal ModelAnimal Models and Related StudiesApoptosisApoptosis PathwayAryl Hydrocarbon ReceptorAssayBEK fibroblast growth factor receptorBEK protein tyrosine kinaseBacterial InfectionsBenignBioassayBioinformaticsBiological AssayBody TissuesCausalityCell BodyCell Communication and SignalingCell Cycle ProgressionCell LocomotionCell MigrationCell MovementCell SignalingCellsCellular MigrationCellular MotilityCharacteristicsCharcot footClinicalComplexComplications of Diabetes MellitusCoupledDataDevelopmentDiabetes ComplicationsDiabetes-Related ComplicationsDiabetic ComplicationsDiabetic FootDiabetic Foot UlcerDiagnosticDioxin ReceptorsDiseaseDisorderEconomic BurdenEpidermisEtiologyFGF-2 receptorFGFR-2Fibroblast Growth Factor Receptor 2FibrosisFlow CytofluorometriesFlow CytofluorometryFlow CytometryFlow MicrofluorimetryFlow MicrofluorometryFoundationsGene TranscriptionGenetic TranscriptionGoalsHealing abnormalHealing delayedHealth Care CostsHealth Care SystemsHealth CostsHistopathologyHumanIL6-response factorImmune responseImpaired healingImpairmentInfectionInflammatory ResponseIntracellular Communication and SignalingKnowledgeLIF-response factorLaboratoriesLegLeg UlcerLower Extremity UlcerMRSAMapsMediatingMethicillin Resistant S. AureusMicroRNAsMicrobial BiofilmsModelingModern ManMolecularMorbidityMorbidity - disease rateNIDDKNational Institute of Diabetes and Digestive and Kidney DiseasesNuclear TranslocatorOrganOutcomePathogenesisPathogenicityPathologyPathway interactionsPatientsPersonsPhenotypePolyaromatic Hydrocarbon ReceptorsPopulationPreventionProgrammed Cell DeathProliferatingQOLQuality of lifeRNA ExpressionRNA SeqRNA sequencingRNAseqReceptor ProteinReceptor SignalingRegulatory PathwayRoleS aureusS epidermidisS. aureusS. epidermidisSTAT1 proteinSamplingSideSignal PathwaySignal Transducer and Activator of Transcription 3Signal TransductionSignal Transduction SystemsSignalingSkinStaph aureusStaphylococcus aureusStaphylococcus epidermidisStat-1 proteinStat-91 proteinStat3 proteinStat91 proteinTCDD ReceptorsTestingTissue SampleTissuesTranscriptionUlcerUlcerationVenousWound InfectionWound RepairWound modelsangiogenesisanti-microbialantimicrobialbacteria infectionbacterial diseasebek fgf receptor kinasebek fibroblast growth factor receptor kinasebek-related fibroblast growth factor receptor-1biofilmbiological signal transductioncausationcell motilitychronic skin woundchronic woundcommensal bacteriacommensal bacterial speciescutaneous microbiomedermal microbiomedevelop therapydevelopmentaldiabetic foot wounddisease causationeffective therapyeffective treatmentepidermal microbiomefightingflow cytophotometrygene signaturesgenetic signatureglobal gene expressionglobal transcription profilehealinghost microbiomehost responsehuman tissueimmune system responseimmunoresponseinfected woundinfection recurrenceinhibitorinnovateinnovationinnovativeinsightintervention developmentmethicillin resistance Staphylococcus aureusmethicillin resistant Staphylococcus aureusmethicillin resistant strains of Staphylococcus aureusmiRNAmicrobiomemigrationmodel of animalmortalitynew drug targetnew druggable targetnew pharmacotherapy targetnew therapeutic targetnew therapy targetnovelnovel drug targetnovel druggable targetnovel pharmacotherapy targetnovel therapeutic targetnovel therapy targetpathogenpathwayreceptorrecurrent infectionrecurring infectionrepairrepairedresponsesignal transducer and activator of transcription 1skin biomeskin microbiomesocial roletargeted drug therapytargeted drug treatmentstargeted therapeutictargeted therapeutic agentstargeted therapytargeted treatmenttherapeutic targettherapy developmenttissue woundtranscription factor Stat91transcriptometranscriptome sequencingtranscriptomic sequencingtranscriptomicstreat woundtreatment developmenttreatment strategywoundwound closurewound environmentwound healingwound healing modelswound managementwound recoverywound resolutionwound therapeuticswound therapywound treatmentwoundingwounds
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Full Description

Project Summary
Diabetic foot ulcers (DFUs) and venous leg ulcers (VLUs) are prevalent chronic wounds with a debilitating impact

on patient quality of life, morbidity, and mortality, imposing a major economic burden to healthcare systems

worldwide. Effective treatments for chronic wounds are scarce. Their efficacy is further limited by the presence

and recurrence of infection. While arising from different etiologies, both DFUs and VLUs share common features

such as a hyperproliferative, non-migratory epidermis, fibrosis, decreased angiogenesis, and a de-regulated

inflammatory response. In addition, a major common characteristic is a shift in the microbiome from benign

commensal bacteria to an abundance of pathogens. Unfortunately, a lack of animal models that closely

recapitulates the human chronic wound condition impedes the understanding of this complex host-microbiome

interaction. Thus, our laboratory focuses on the analyses of human tissue samples to decipher core molecular

pathways that contribute to the non-healing phenotype of DFUs and VLUs. We used tissue samples from DFUs

and VLUs (n=19), RNAseq and bioinformatic analysis to determine a core chronic wound transcriptome common

for both types of chronic wounds. Analyses of this novel and unique core chronic wound gene signature indicates

suppression of two host response pathways that may be modulated by the microbiome: the aryl hydrocarbon

receptor (AHR) signaling pathway and the signal transducer and activator of transcription 3 (STAT3) pathway.

As these pathways have been implicated in host antimicrobial response, as well as cell migration, and

proliferation, we postulate that suppression of the AHR and STAT3 signaling pathways is mediated by a

dysregulated microbiome and impairs chronic wound healing. Thus, the goal of this proposal is to understand

the mechanisms by which the wound microbiome modulates the AHR (Aim 1) and STAT3 (Aim 2) pathways in

DFUs and VLUs. We will use an integrative approach that includes patients’ wound samples, primary human

cells and human skin ex vivo wound infection models. By using patient-relevant wound models, we will greatly

advance understanding of the mechanisms by which the wound microbiome modulates the host response in

chronic wounds and contribute to the inhibition of healing. In turn, understanding the interaction of the

microbiome with the AHR and STAT3 pathways will further identify novel therapeutic targets for wound infections.

Prevention and treatment of wound infections will have a major impact on healing outcomes of both DFUs and

VLUs, decreasing lower leg amputations, morbidity and mortality.

Grant Number: 5F30DK132806-04
NIH Institute/Center: NIH

Principal Investigator: Jamie Burgess

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