grant

Converting cytoskeletal forces into biochemical signals

Organization ROCKEFELLER UNIVERSITYLocation NEW YORK, UNITED STATESPosted 15 Mar 2023Deadline 31 Jan 2027
NIHUS FederalResearch GrantFY2025AP-1AP-1 Enhancer-Binding ProteinAP1AP1 proteinActin FilamentsActin-Activated ATPaseActinsActivator Protein-1AutoregulationBindingBiochemicalBiological FunctionBiological ProcessBiophysical ProcessBiophysicsBody TissuesBundlingCRISPRCRISPR/Cas systemCancersCell AttachmentCell BodyCell Communication and SignalingCell Cycle ArrestCell DeathCell FunctionCell LineCell NucleusCell PhysiologyCell ProcessCell SignalingCell-Matrix AdhesionsCell-Matrix JunctionCellLineCellsCellular AssayCellular FunctionCellular Immune FunctionCellular MatrixCellular MechanotransductionCellular PhysiologyCellular ProcessClustered Regularly Interspaced Short Palindromic RepeatsComplexCoupledCryo-electron MicroscopyCryo-electron tomographyCryoelectron MicroscopyCytoplasmCytoskeletal ModelingCytoskeletal OrganizationCytoskeletal Organization ProcessCytoskeletal ReorganizationCytoskeletal SystemCytoskeletonDataDevelopmentDiseaseDisorderDissectionDysfunctionElectron CryomicroscopyEnhancer-Binding Protein AP1EnvironmentEvaluationEventFHL1FHL1 geneFHL1BFLH1AFilamentFluorescence Light MicroscopyFluorescence MicroscopyFour and a half LIM domains 1Functional disorderGene Action RegulationGene ExpressionGene Expression RegulationGene RegulationGene Regulation ProcessGenerationsGenesHomeostasisIndividualIntracellular Communication and SignalingKYO-TKnock-outKnockoutLIM protein SLIMMERLINLinkLobular Intraepithelial NeoplasiaLobular NeoplasiaMGC111107Macromolecular StructureMalignant NeoplasmsMalignant TumorMechanical Signal TransductionMechanicsMechanosensory TransductionMediatingMembraneMethodsMicrofilamentsMolecular InteractionMolecular StructureMotorMuscular DystrophiesMyodystrophicaMyodystrophyMyofilamentsMyosin ATPaseMyosin Adenosine TriphosphataseMyosin AdenosinetriphosphataseMyosinsNuclearNucleusOutcomeOutputPathway interactionsPhysical condensationPhysiological HomeostasisPhysiopathologyPolymersProtein EngineeringProteinsRNA SeqRNA sequencingRNAseqReportingResolutionRoleRuptureSLIM1Signal TransductionSignal Transduction SystemsSignalingSiteStrains Cell LinesStress FibersStructureSubcellular ProcessTechnologyTestingTherapeuticTissuesTranscription Factor AP-1TransmissionVASPVisualizationWorkXMPMAZYXZYX genealpha ActininbA535K18.1biological signal transductionbiophysical foundationbiophysical mechanismbiophysical principlesbiophysical sciencescell assaycondensationcryo-EMcryo-EM tomographycryoEMcryoEM tomographycryoelectron tomographycryogenic electron microscopycultured cell linedevelopmentalelectron cryo-tomographyforce feedbackgenetic protein engineeringimmune functionin vivoinhibitorinnovateinnovationinnovativeintracellular skeletonmalignancymechanicmechanicalmechanical cuemechanical signalmechanosensingmechanotransductionmembrane structuremuscle dystrophynanometer resolutionnecrocytosisneoplasm/cancerpathophysiologypathwaypolymerpolymericpolymerizationpreventpreventingprotein crosslinkprotein designreconstitutereconstitutionreconstructionrecruitrepairrepairedresolutionssocial roletherapeutic targettranscriptome sequencingtranscriptomic sequencingtransmission processvasodilator-stimulated phosphoproteinzyxinα-Actinin
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Full Description

PROJECT SUMMARY
Cells perceive mechanical cues in their local environments, which must be converted into intracellular

biochemical signals to modulate cellular physiology and control gene expression. There is increasing

appreciation for mechanical signal transduction’s (“mechanotransduction”) critical role in development and its

dysfunction in disease states such as cancer. However, in contrast to canonical signal transduction, cellular force

sensing is poorly understood, hampering efforts to define mechanistically distinct mechanotransduction

pathways, delineate their specific biological functions, and target them therapeutically.

The actin cytoskeleton, a network of dynamic actin filaments, myosin motor proteins, and hundreds of

associated factors, enables cells to mechanically interface with their surroundings. The cytoskeleton is classically

understood to serve as a force generation and transmission apparatus that indirectly facilitates mechano-

transduction through its physical linkages to membrane-anchored sites which mediate force signal conversion

(e.g. cell-cell and cell-matrix adhesions). However, we and others have recently reported direct binding of soluble

cytosolic proteins containing tandem arrays of LIM (LIN-11, Isl-1 & Mec-3) domains to tensed actin filaments,

suggesting that the cytoskeleton itself may have the capacity to transduce forces into biochemical signals. Here

I propose to test the hypothesis that force-activated actin binding by distinct LIM proteins is upstream of

functionally discrete downstream mechanotransduction pathways. Through cellular assays and biophysical

reconstitution, we will investigate how the representative force-activated actin binding LIM proteins zyxin (Aim 1)

and FHL1/2 (Four-and-a-Half LIM domains 1/2, Aim 2) mediate distinct downstream functions in cytoplasmic

cytoskeletal damage repair and nuclear gene expression regulation, respectively. We will then innovatively

interface these approaches with cryo-electron microscopy (cryo-EM) to visualize force-activated actin binding by

LIM proteins in structural detail (Aim 3). Our studies will establish how a conserved mechanism of force

transduction through LIM domains is linked to distinct downstream signaling outcomes, which is likely to reveal

general principles underlying the modular organization of cytoskeletal mechanical signaling networks. In the

longer term, this work will enable precision dissection of context-specific biological functions of LIM proteins in

vivo, facilitating rigorous evaluation of their potential as therapeutic targets.

Grant Number: 5R01GM146880-03
NIH Institute/Center: NIH

Principal Investigator: GREGORY ALUSHIN

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