grant

Cell cycle regulation in Fetal Alcohol Spectrum Disorders

Organization UPSTATE MEDICAL UNIVERSITYLocation SYRACUSE, UNITED STATESPosted 1 Jul 2020Deadline 31 Aug 2026
NIHUS FederalResearch GrantFY2025APF-1ATP-Dependent Proteolysis Factor 1AddressAffectAlcohol Chemical ClassAlcoholsApoptoticBasic Mechanisms of SUMOylationBirth DefectsBody TissuesBone-Derived Transforming Growth FactorCell BodyCell Communication and SignalingCell CycleCell Cycle ArrestCell Cycle ControlCell Cycle GenesCell Cycle KineticsCell Cycle ProgressionCell Cycle RegulationCell Cycle StageCell DifferentiationCell Differentiation processCell Division CycleCell Division Cycle GenesCell Growth in NumberCell IsolationCell KineticsCell MultiplicationCell ProliferationCell SegregationCell SeparationCell Separation TechnologyCell SignalingCellsCellular ProliferationChIP SequencingChIP-seqChIPseqChromatinCiliaCognitive DisturbanceCognitive ImpairmentCognitive declineCognitive function abnormalCongenital AbnormalityCongenital Anatomical AbnormalityCongenital DefectsCongenital DeformityCongenital MalformationCorpus StriatumCorpus striatum structureCraniofacial AbnormalitiesDNADNA ContentDNA DamageDNA Damage RepairDNA Double Strand BreakDNA IndexDNA InjuryDNA PloidyDNA RepairDNA ReplicationDNA SynthesisDNA biosynthesisDataDeoxyribonucleic AcidDevelopmentDifferentation MarkersDifferentiation AntigensDifferentiation MarkersDisturbance in cognitionDoseEmbryoEmbryonicEnzyme GeneEnzymesEpigeneticEpigenetic ChangeEpigenetic MechanismEpigenetic ProcessExposure toFASDFetal Alcohol ExposureFetal Alcohol Spectrum DisorderFetal ETOH ExposureFetal Ethanol ExposureFlow CytofluorometriesFlow CytofluorometryFlow CytometryFlow MicrofluorimetryFlow MicrofluorometryFore-BrainForebrainG1/S TransitionGene Action RegulationGene Down-RegulationGene Expression RegulationGene RegulationGene Regulation ProcessGeneralized GrowthGenesGestationGoalsGrowthHMG-20High Mobility Protein 20HistonesHourHumanHypophysisHypophysis CerebriImageImpaired cognitionImpairmentIn Utero Alcohol ExposureIn Utero ETOH ExposureIn Utero Ethanol ExposureIntracellular Communication and SignalingLive BirthMarker AntigensMetabolic Protein DegradationMiceMice MammalsMilk Growth FactorModern ManModificationMolecularMurineMusNeural Tube ClosureNeural tubeNormal CellPathogenicityPathway interactionsPituitaryPituitary GlandPituitary Nervous SystemPlatelet Transforming Growth FactorPloidiesPopulationPost-Translational Modification Protein/Amino Acid BiochemistryPost-Translational ModificationsPost-Translational Protein ModificationPost-Translational Protein ProcessingPosttranslational ModificationsPosttranslational Protein ProcessingPregnancyPrenatal Alcohol ExposurePrenatal ETOH ExposurePrenatal Ethanol ExposureProcessProliferatingProsencephalonProtein DynamicsProtein ModificationProtein TraffickingProtein TurnoverProteinsRNA SeqRNA sequencingRNAseqRegulatory Protein DegradationReplication ErrorSUMOylationSamplingSignal TransductionSignal Transduction SystemsSignalingSiteSonic Hedgehog (Shh) PathwaySonic Hedgehog PathwayStriate BodyStriatumStructureSumoylation PathwaySymptomsTGF BTGF-betaTGF-βTGFbetaTGFβTechniquesTestingTissue GrowthTissuesTranscription RepressionTransforming Growth Factor betaTransforming Growth Factor-Beta Family GeneUbiquitinUnscheduled DNA SynthesisVisualizationWorkalcohol exposedalcohol exposurealcohol-exposed pregnancybehavioral impairmentbiological signal transductionbrain abnormalitiescdc Genescell determinationcell preparationcell sortingcellular differentiationchromatin immunoprecipitation coupled with sequencingchromatin immunoprecipitation followed by sequencingchromatin immunoprecipitation with sequencingchromatin immunoprecipitation-seqchromatin immunoprecipitation-sequencingchromatin modificationchromosome complementcognitive dysfunctioncognitive losscraniofacial anomaliescraniofacial defectscraniofacial malformationdevelop therapydevelopmentalembryonic alcohol exposureembryonic ethanol exposureepigenetic regulationepigeneticallyepigenomeethanol exposedethanol exposureexperimentexperimental researchexperimental studyexperimentsexposed to alcoholexposed to alcohol prenatallyexposed to ethanolexposure to alcoholexposure to ethanolflow cytophotometrygene networkgene repressiongenome scalegenome-widegenomewidegestation ETOH exposuregestation alcohol exposuregestation ethanol exposuregestational ethanol exposurehuman diseaseimagingimpaired behaviorinnovateinnovationinnovativeinsightintervention developmentlater in lifelater lifemouse modelmurine modelnew approachesnovelnovel approachesnovel strategiesnovel strategyontogenyorgan developmentorgan growthpathwayphysical impairmentpregnancy ETOH exposurepregnancy alcohol exposurepregnancy ethanol exposureprematureprematurityprenatalprenatally alcohol exposedprenatally exposed to alcoholprotein degradationprotein expressionprotein protein interactionprotein transportresponsestriataltherapeutic targettherapy developmenttranscriptome profilingtranscriptome sequencingtranscriptomic profilingtranscriptomic sequencingtreatment developmentunborn
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Full Description

Project Summary
Fetal Alcohol Spectrum Disorders (FASD) affects up to 5% of live births in the US each year and results in life-

long physical, cognitive, and behavioral impairments. Alcohol exposure during neurulation, the formation and

closure of the neural tube (~ 4th week of pregnancy in humans, gestational days 8-10 in mice), is associated

with abnormal growth of midline structures, such as the cortex, septum, pituitary, and ventricles, and

neurofunctional changes later in life. My preliminary work suggested that neurulation-stage alcohol causes cell

cycle arrest or delayed cell cycle progression, resulting in disrupted proliferation and, ultimately, anomalous

tissue and organ development. Specifically, we performed whole transcriptome profiling of the rostroventral

neural tube 6 hr after alcohol exposure and found that many genes and gene networks related to cell cycle

regulation and cell proliferation were altered by alcohol. In addition, neurulation-stage alcohol caused

significant dysregulation of the sonic hedgehog (Shh) pathway and cell cycle genes. These changes in

morphogenic signaling were concomitant with smaller rostral neural tube volumes and fewer actively dividing

cells in alcohol-exposed embryos. In this proposal, we use a well-characterized mouse model of FASD to test

the hypothesis that neurulation-stage alcohol exposure alters cell cycle regulation in the rostral neural tube

through disruption of processes that regulate cell cycle progression. Aim 1 analyzes cell cycle arrest and G1-

specific processes in the neural tube following prenatal alcohol. Preliminary data suggest dysregulation of

molecular mechanisms that control the successful transition between cell cycle stages and the DNA damage

response, possibly leading to impaired DNA integrity and replication errors. Aim 2 investigates pathways that

control protein degradation and trafficking during the cell cycle, following up on previous work showing

downregulation of genes encoding ubiquitylation enzymes by prenatal alcohol. Finally, Aim 3 examines

epigenetic marks associated with chromatin that regulate cell cycle progression, as pathways related to

chromatin modifications were found to altered by neurulation-stage alcohol in our preliminary studies. These

experiments will provide evidence that mechanisms of cell cycle progression represent an under-studied

pathway through which prenatal alcohol causes symptoms of FASD.

Grant Number: 5R00AA028273-05
NIH Institute/Center: NIH

Principal Investigator: Karen Boschen

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