grant

Basic immunological toolbox for genus Peromsycus, infection tolerant reservoirs of zoonotic agents

Organization UNIVERSITY OF CALIFORNIA-IRVINELocation IRVINE, UNITED STATESPosted 1 Jul 2025Deadline 30 Jun 2027
NIHUS FederalResearch GrantFY20257S Gamma GlobulinAcuteAcute-Phase ProteinsAcute-Phase ReactantsAddressAffinityAgingAgonistAgricultureAmino Acid SequenceAnaplasmosisAnimalsAntibodiesAppearanceArgasidaeAssayB burgdorferiB. burgdorferiBabesia infectionBabesia parasite infectionBabesiosisBatsBehaviorBioassayBiological AssayBiological MarkersBionomicsBlood leukocyteBorrelia burgdorferiBorrelia burgdorferi sensu strictoBorreliella burgdorferiBrachydanio rerioBreedingCD14CD14 geneCD19CD19 geneChiropteraClinical Treatment MoabCommon Rat StrainsCommunicable DiseasesCompetenceConfusionConfusional StateConstant RegionCricetidaeCricetinaeDanio rerioDeer MouseDevelopmentDisciplineDiseaseDisorderDrosophilaDrosophila genusEcologyFamilyFc ReceptorFlow CytofluorometriesFlow CytofluorometryFlow CytometryFlow MicrofluorimetryFlow MicrofluorometryFoundationsFutureGeneticGenetic DiversityGenetic VariationGoalsHamstersHamsters MammalsHandHantavirusHantavirus Pulmonary SyndromeHard TicksHardbacked TicksHouse miceHumanIg Constant RegionIgGImmune responseImmunityImmunochemical ImmunologicImmunoglobulin Constant RegionImmunoglobulin GImmunologicImmunologicalImmunologicallyImmunologicsImmunologyInfectionInfectious DiseasesInfectious DisorderInflammatory ResponseInvestigationInvestigatorsIxodid ticksIxodidaeLength of LifeLeukocytesLeukocytes Reticuloendothelial SystemLigandsLongevityLyme BorreliosisLyme DiseaseLyme Disease SpirocheteMaintenanceMammaliaMammalsMarrow leukocyteMeasuresMental ConfusionMiceMice MammalsMicrobiologyMicrotusModelingModern ManModificationMonoclonal AntibodiesMuridaeMuridsMurineMusMus musculusNatureNorth AmericaOrnithodorosOrthohantavirusesOutcomePeptidesPerformancePeromyscusPhenotypePiroplasmosisPlaguePopulationPowassanPowassan virusPrimary Protein StructureProteinsPublic HealthRNA SeqRNA sequencingRNAseqRatRats MammalsRattusReagentRelapsing Fever TicksReproductionResearch PersonnelResearch ResourcesResearchersResourcesRodentRodentiaRodents MammalsSoft TicksSoftbacked TicksSortingSpecificitySystemTestingTick-Borne DiseasesTimeVaccinesViral EncephalitisViral Infectious EncephalomyelitisVoleWhite Blood CellsWhite CellWorkYersinia pestis diseaseZebra DanioZebra FishZebrafishZoonosesZoonoticZoonotic Infectionantibody receptorbio-markersbiologic markerbiomarkercross reactivitycytokinedeermousedevelopmentalexperimentexperimental researchexperimental studyexperimentsfield mouseflow cytophotometryfootfruit flygenome scalegenome-widegenomewidehandshard-bodied tickshost responseimmune system responseimmunoresponseinfected with Babesiainnovateinnovationinnovativeinterestlife spanlifespanlyme spirochetemAbsmembermodel organismmonoclonal Abspathogenprotein sequenceresponserestraintscRNA sequencingscRNA-seqsingle cell RNA-seqsingle cell RNAseqsingle cell expression profilingsingle cell transcriptomic profilingsingle-cell RNA sequencingsoft bodied ticksystemic inflammationsystemic inflammatory responsetick bitetick-borne illnesstickborne diseasetickborne illnesstooltranscriptome sequencingtranscriptomic sequencingwhite blood cellwhite blood corpuscle
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Full Description

Project Summary/Abstract
Peromyscus leucopus, the white-footed deermouse, is a natural host and major reservoir for the

agents of Lyme disease, anaplasmosis, and babesiosis among other zoonoses in North America.

The related species P. maniculatus is a reservoir for hantavirus as well as Lyme disease. While

mouse-like in appearance, these deermice are more closely related to hamsters and voles than to

Mus or Rattus. P. leucopus also has longevity 2-3 times that of the house mouse and has a more

restrained inflammatory response to TLR agonists and infection. While translational interest in

P. leucopus increases, including as a target for field vaccines and for genetic modification and then

environmental release, there are very limited tools besides genome-wide and targeted RNA-seq

for in-depth study of the immunology and host responses of these animals. Examples are reagents

and assays for flow cytometry and IgG subclasses. Antibodies for phenotyping white cells that are

developed for study of mice or humans seldom have sufficient cross-reactivity with deermouse

orthologous proteins to succeed. This application for a 2-year developmental project recognizes

this need for the field to advance and proposes to take the first steps to remedy the deficiency.

Using our access to a closed colony of P. leucopus that is representative of wild populations in

terms of genetic diversity, we will carry out work on the following specific aims:

Aim 1. Antibodies for phenotyping leukocytes of Peromyscus. First will be a pan-leukocyte

monoclonal antibody suitable for flow cytometry and sorting. The isolated leukocytes from

different outbred deermice will be subjected to multiplexed scRNA-seq, the results of which

provide either confirmation of provisional choices (i.e. CD14 and CD19) or guidance on

alternatives for marker antibodies of narrower specificity.

Aim 2. IgG subclasses of Peromyscus. Using the deduced amino acid sequences for constant

regions of heavy chains, we will characterize and measure subclasses by LC-MS/MS.

Discriminating peptides will be used for eliciting sub-class specific antibodies. The affinities of

different subclasses for Fc receptor ligands, like Protein A will be assessed.

Aim 3. Application of tools to models of systemic inflammation and of infection. The utility and

informativeness of the outcomes of Aims 1 and 2 will be assessed in our established P. leucopus

models of infection with B. burgdorferi or systemic inflammation from TLR agonists.

Grant Number: 1R21AI185311-01A1
NIH Institute/Center: NIH

Principal Investigator: Alan Barbour

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