grant

Anticodon Engineered tRNA for the Treatment of Hereditary Eye Disease

Organization UNIVERSITY OF IOWALocation IOWA CITY, UNITED STATESPosted 1 Jan 2025Deadline 31 Dec 2026
NIHUS FederalResearch GrantFY2025AccountingAgingAmino AcidsAnticodonAreaAssayBase PairingBioassayBiological AssayBiological FunctionBiological ProcessBody TissuesBypassCRISPR approachCRISPR based approachCRISPR methodCRISPR methodologyCRISPR techniqueCRISPR technologyCRISPR toolsCRISPR-CAS-9CRISPR-based methodCRISPR-based techniqueCRISPR-based technologyCRISPR-based toolCRISPR/CAS approachCRISPR/Cas methodCRISPR/Cas technologyCRISPR/Cas9CRISPR/Cas9 technologyCas nuclease technologyClustered Regularly Interspaced Short Palindromic Repeats approachClustered Regularly Interspaced Short Palindromic Repeats methodClustered Regularly Interspaced Short Palindromic Repeats methodologyClustered Regularly Interspaced Short Palindromic Repeats techniqueClustered Regularly Interspaced Short Palindromic Repeats technologyCodonCodon NucleotidesComplementComplement ProteinsCorneal DiseasesCorneal DisorderDNA AlterationDNA Sequence AlterationDNA mutationDataDifferences between sexesDiffers between sexesDiseaseDisorderDrugsEngineeringEyeEye diseasesEyeballGenetic AlterationGenetic ChangeGenetic defectGenetic mutationGlaucomaHandHereditary DiseaseHereditary Eye DiseasesHumanIn vivo analysisInborn Genetic DiseasesInbreedingInherited disorderIris DiseasesIris DisorderLuciferase ImmunologicLuciferasesMediatingMedicationMiceMice MammalsModelingModern ManMolecularMouse StrainsMurineMusMutateMutationNonsense CodonNonsense MutationOutcomePharmaceutical PreparationsPhenotypePigmentsPoint MutationPremature Stop CodonProteinsReporterReporter GenesRetinal DegenerationRetinal DiseasesRetinal DisorderRetinal NeuroblastomaRetinoblastomaSafetySequence AlterationSex DifferencesSexual differencesSightStop CodonSyndromeTermination CodonTerminator CodonTestingTherapeuticTherapeutic StudiesTherapy ResearchTissuesTranscriptTransfer RNATransgenesTransgenic MiceTransgenic OrganismsTranslation Stop SignalTranslationsTriplet Codon-Amino Acid AdaptorVariantVariationVisionage associated alterationsage associated changesage correlated alterationsage correlated changesage dependent alterationsage dependent changesage induced alterationsage induced changesage related alterationsage related changesage specific alterationsage specific changesaging associated alterationsaging associated changesaging correlated alterationsaging correlated changesaging dependent alterationsaging dependent changesaging induced alterationsaging induced changesaging related alterationsaging related changesaging specific alterationsaging specific changesalterations with ageaminoacidcell typechanges with agecohortcomplementationcongenital cataractcornea disorderdegenerative retina diseasesdisease phenotypedrug/agentefficacy testingexperimentexperimental researchexperimental studyexperimentseye disordergenome mutationgenomic alterationglaucomatoushandshereditary cataracthereditary disorderheritable disorderhuman diseasein vivoin vivo evaluationin vivo testinginborn errorinherited cataractinherited diseasesinherited genetic diseaseinherited genetic disordermRNA Decaymouse modelmurine modelnon-sense mutationocular diseaseocular disorderophthalmopathypigmentprematureprematuritypublic health relevanceresponseretina degenerationretina diseaseretina disorderretina neuroblastomaretinal degenerativeretinal degenerative diseasesretinopathysex based differencessex-dependent differencessex-related differencessex-specific differencestRNAtransfer Ribonucleic acidstransgenetransgenictranslationvisual function
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Full Description

Summary
Nonsense mutations are point mutations that convert an amino acid encoding codon into a premature

termination codon (PTC). The consequences of PTCs are nonsense-mediated mRNA decay, and for

transcripts that persist, premature translation termination. PTCs are a major cause of human disease,

accounting for >10% of all described disease-causing genetic alterations, including nearly all forms of

hereditary eye disease (retinal disease, corneal disease, glaucoma, congenital cataract, retinoblastoma,

syndromes impacting vision, and others). There has been a longstanding appreciation that therapies promoting

readthrough of PTCs might be broadly useful for treating many different diseases which are all fundamentally

initiated by PTCs. In recent years there has been a surge in PTC therapy research using modified suppressor

tRNA molecules. In this approach, tRNA with altered anticodons recognizing stop codons are utilized to base-

pair to the PTC and allow translation. Remarkably, suppressor tRNAs appear to recognize PTCs and natural

termination codons distinctly. Recently, we have conducted screens for anticodon engineered tRNA (ACE-

tRNA) with a high suppression activity. Here, we utilize a newly generated strain of transgenic mice that

ubiquitously express one of these, Arg-TGA ACE-tRNA, to assess its in vivo efficacy, safety, and activity in

multiple ocular cell types. To achieve this, Specific Aim 1 will assess the ability of transgenic encoded ACE-

tRNA-ArgUGA to rescue the pigment dispersing iris disease caused by the GpnmbR150X PTC mutation and the

retinal degeneration caused by the Rd3R107X PTC mutation. Control cohorts will also be characterized with a

variety of assays to test whether there is phenotypic evidence of damage induced in ocular tissues by

presence of the ACE-tRNA-ArgUGA. To complement these experiments, Specific Aim 2 uses a reporter strain of

mice to characterize whether there are any ocular cell types with unique features changing their sensitivity to

ACE-tRNA-ArgUGA. Broadly, the results from SA1 and SA2 will form a rigorous initial test of in vivo efficacy,

safety, and cellular activity of ACE-tRNA in the eye. The combined outcomes allow many opportunities to

observe the degree to which this ACE-tRNA-ArgUGA can provided sustained correction of PTC mutations in the

eye, whether it induces any additional detectable abnormalities, and whether there are any yet unknown

biological processes regulating protein translation in some cell-types that impact how ACE-tRNA function.

Grant Number: 1R21EY036998-01
NIH Institute/Center: NIH

Principal Investigator: Michael Anderson

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