grant

Alleviating Mitochondrial Dysfunction in PERK-deficient Neurodegenerative Disease

Organization UNIVERSITY OF CALIFORNIA, SAN DIEGOLocation LA JOLLA, UNITED STATESPosted 20 Nov 2024Deadline 31 Mar 2027
NIHUS FederalResearch GrantFY2025AD dementiaAD related dementiaADRDAffectAllelesAllelomorphsAlzheimer Type DementiaAlzheimer disease dementiaAlzheimer sclerosisAlzheimer syndromeAlzheimer'sAlzheimer's DiseaseAlzheimer's and related dementiasAlzheimer's dementia and related dementiaAlzheimer's dementia or related dementiaAlzheimer's disease and related dementiaAlzheimer's disease and related disordersAlzheimer's disease or a related dementiaAlzheimer's disease or a related disorderAlzheimer's disease or related dementiaAlzheimer's disease related dementiaAlzheimers DementiaAmpullary CrestApoptosisApoptosis PathwayBiologyCausalityCell BodyCell Communication and SignalingCell Culture TechniquesCell SignalingCell modelCellsCellular StressCellular Stress ResponseCellular modelChaperoneChronicClinicalComplexCrista ampullarisDegenerative Neurologic DisordersDiseaseDisorderEIF-2 alphaEIF-2alphaEIF-2αER stressEndoplasmic ReticulumEnvironmental FactorEnvironmental Risk FactorErgastoplasmEtiologyFibroblastsGene Expression MonitoringGene Expression Pattern AnalysisGene Expression ProfilingGene TranscriptionGenesGeneticGenetic InductionGenetic TranscriptionGoalsHealthHumanImpairmentIndividualIntracellular Communication and SignalingKinasesLinkMembraneMitochondriaModelingModern ManMolecular ChaperonesMorphologyNerve CellsNerve DegenerationNerve UnitNervous System Degenerative DiseasesNeural CellNeural Degenerative DiseasesNeural degenerative DisordersNeurocyteNeurodegenerative DiseasesNeurodegenerative DisordersNeurologic Degenerative ConditionsNeuron DegenerationNeuronal DysfunctionNeuronsPERK kinasePRK-like ER kinasePathogenesisPathologicPatientsPhosphatidesPhospholipidsPhosphorylationPhosphotransferase GenePhosphotransferasesPrimary Senile Degenerative DementiaProgrammed Cell DeathProgressive Supranuclear OphthalmoplegiaProgressive Supranuclear PalsyProtein CleavageProtein ImportProtein PhosphorylationProteinsProteolysisRNA ExpressionRNA SeqRNA sequencingRNAseqRegulationRespiratory ChainRoleSignal InductionSignal PathwaySignal TransductionSignal Transduction SystemsSignalingSiteSteele-Richardson-Olszewski DiseaseSteele-Richardson-Olszewski SyndromeStressStress Response SignalingTauopathiesTherapeuticTranscript Expression AnalysesTranscript Expression AnalysisTranscriptionTransphosphorylasesVariantVariationaberrant agingabnormal agingabrogation of mitochondrial dysfunctionalleviating mitochondrial dysfunctionalpha Subunit Eukaryotic Initiation Factor 2ameliorating mitochondrial dysfunctionanalyze gene expressionattenuation of mitochondrial dysfunctionbiological adaptation to stressbiological signal transductioncausationcell culturecell culturescell stressclinical diagnosiscrista ampullacristaedegenerative diseases of motor and sensory neuronsdegenerative neurological diseasesdisease causationdysfunctional age related changedysfunctional agingendoplasmic reticulum stressenvironmental riskgene expression analysisgene expression assayhuman modelimpaired agingimprovedinterestmaladaptive agingmembrane structuremitigating mitochondrial impairmentmitochondrialmitochondrial dysfunctionmitochondrial rejuvenationmodel of humanneural degenerationneural dysfunctionneurodegenerationneurodegenerativeneurodegenerative illnessneurodegenerative phenotypeneurological degenerationneuronalneuronal degenerationneuronal survivalneuropathologic tauneuropathological taupathological age related changespathological agingperk gene productpharmacologicprimary degenerative dementiaprogramsprotein homeostasisproteostasisreaction; crisisreducing mitochondrial dysfunctionrespiratoryresponserestorationsenile dementia of the Alzheimer typesmall moleculesocial rolestress responsestress; reactionsuppress mitochondrial dysfunctiontau associated neurodegenerationtau associated neurodegenerative processtau driven neurodegenerationtau induced degenerationtau induced neurodegenerationtau mediated neurodegenerationtau neurodegenerative diseasetau neuropathologytau pathologytau pathophysiologytau proteinopathytau related neurodegenerationtau-induced pathologytauopathic neurodegenerative disordertauopathytranscriptional profilingtranscriptome sequencingtranscriptomic sequencing
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Full Description

PROJECT SUMMARY
Mitochondrial dysfunction and endoplasmic reticulum (ER) stress are hallmarks of pathologic aging and are

intricately linked in the onset and pathogenesis of etiologically-diverse neurodegenerative disorders including

Alzheimer’s disease (AD) and related dementias (ADRDs). This has led to significant interest in understanding

how cells regulate mitochondria in response to ER stress. Intriguingly, the ER stress-responsive kinase PERK

is localized to ER-mitochondria contact sites where it acts as an effector of both the unfolded protein response

(UPR) and the integrated stress response (ISR). Additionally, PERK-dependent transcriptional and translational

signaling modulates nearly all aspects of mitochondrial biology including remodeling of mitochondrial cristae and

respiratory complexes to enhance energy capacity, regulation of mitochondrial proteostasis (i.e., protein import,

chaperone activity, and proteolysis), and remodeling of membrane phospholipid composition to induce protective

mitochondrial elongation. Through these mechanisms PERK protects mitochondria during ER stress; however,

persistent PERK activation induced by severe or chronic ER stress leads to apoptosis. Thus, PERK signaling

both promotes adaptive mitochondrial remodeling and dictates cell fate in response to varying levels of cellular

stress. The importance of PERK in regulating adaptation and survival is further supported by clinical, genetic,

and pharmacologic evidence demonstrating that imbalanced PERK signaling contributes to the pathogenesis of

etiologically-diverse neurodegenerative diseases. Hypomorphic variants in the gene that encodes PERK

(EIF2AK3) predispose individuals to tauopathies such as progressive supranuclear palsy (PSP) and late-stage

AD. In addition, exogenous PERK activation mitigates tau pathology in PSP, further indicating that protective

PERK signaling is insufficient in the pathogenesis of this disease. Collectively, these observations establish

PERK as a critical regulator of mitochondrial adaptation to cellular insult and suggest that imbalances in PERK

signaling contribute to mitochondrial dysfunction implicated in neurodegenerative disease pathogenesis. Using

cell culture models derived from patients expressing a hypomorphic PERK variant, I will show that deficiencies

in PERK signaling impair mitochondria and contribute to neurodegenerative phenotypes such as tau pathology

(Aim 1). Further, I will demonstrate that pharmacologic activation of the ISR—a stress-responsive program

comprised of the eIF2α kinases GCN2, HRI, PKR, and PERK—mitigates mitochondrial dysfunction and improves

neuronal survival in a human neuronal model of PERK-deficient neurodegeneration (Aim 2). These efforts are

significant as they will define a critical role for PERK in regulating mitochondrial adaptation during

neurodegeneration and establish pharmacologic ISR activation as a potential therapeutic strategy against

neurodegenerative disease—for which no disease-modifying treatments are currently available.

Grant Number: 7F30AG081061-03
NIH Institute/Center: NIH

Principal Investigator: Kelsey Baron

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