grant

Alcohol-Induced Metabolome-Epigenome Dysfunction and Alzheimer's Disease Risk

Organization UNIVERSITY OF FLORIDALocation GAINESVILLE, UNITED STATESPosted 5 Sept 2025Deadline 30 Apr 2027
NIHUS FederalResearch GrantFY2025AD dementiaAD modelAD pathologyALDHATAC sequencingATAC-seqATACseqAbsolute ethanolAccelerationAddressAffectAgeAgingAlcohol Chemical ClassAlcohol DrinkingAlcohol consumptionAlcoholismAlcoholsAlzheimer Type DementiaAlzheimer disease dementiaAlzheimer risk factorAlzheimer sclerosisAlzheimer syndromeAlzheimer'sAlzheimer's DiseaseAlzheimer's disease modelAlzheimer's disease pathologyAlzheimer's disease riskAlzheimer's pathologyAlzheimers DementiaAmmon HornAssay for Transposase-Accessible Chromatin using sequencingAstrocytesAstrocytusAstrogliaAwardBrainBrain Nervous SystemBusiness-Friendly AtmosphereCASP-14CarbohydratesCell BodyCell NucleusCellsChromatinChronicCognitive deficitsComplexCornu AmmonisDNA Molecular BiologyDNA mutationDevelopmentDisease ProgressionDysfunctionETOHEast AsiaEastern AsiaEncephalonEnergy ExpenditureEnergy MetabolismEnsureEnzyme GeneEnzymesEpidemiologyEpigeneticEpigenetic ChangeEpigenetic MechanismEpigenetic ProcessEtOH drinkingEtOH useEthanolEthanol MetabolismEthyl AlcoholExhibitsFar EastFatsFatty acid glycerol estersFemaleFlushingFoundationsFunctional disorderGC MSGCMSGas-Liquid-Mass Spectrometry ChromatographyGene DeregulationGene ExpressionGenetic ChangeGenetic defectGenetic mutationGoalsGrain AlcoholGrantHippocampusHomeHumanHuman GeneticsImpairmentIndirect CalorimetryIndividualInhalationInhalingIntermediary MetabolismInterviewInvestigationInvestigatorsIowaKI miceKO miceKnock-in MouseKnock-out MiceKnockout MiceKnowledgeLaboratoriesLinkLipidsLow Molecular Weight Nuclear RNAMICE enzymeMT-bound tauMass FragmentographiesMass FragmentographyMass-Gas Chromatography SpectrometryMass-Gas Chromatography Spectrum AnalysisMemoryMentorsMetabolicMetabolic DiseasesMetabolic DisorderMetabolic ProcessesMetabolic dysfunctionMetabolismMethylcarbinolMiceMice MammalsMitochondriaModelingModern ManMolecular BiologyMolecular FingerprintingMolecular ProfilingMurineMusMutationNerve CellsNerve UnitNeural CellNeurocyteNeuronsNuclearNucleusNull MouseOncogene DeregulationPathway interactionsPatientsPeer ReviewPhasePhysiopathologyPreparationPrevalencePrimary Senile Degenerative DementiaPsychiatryPublic HealthResearchResearch PersonnelResearchersRespiration CalorimetryRiskRoleSmall Molecular Weight RNASmall Nuclear RNATauopathiesTechniquesTestingTherapeutic InterventionThesaurismosisTrainingUniversitiesWritingabnormal tauaccelerated agingaccelerated biological ageaccelerated biological agingage accelerationagesaging associated diseaseaging associated disordersaging related diseaseaging related disordersalcohol abuse therapyalcohol abuse treatmentalcohol effectalcohol exposedalcohol exposurealcohol ingestionalcohol intakealcohol metabolismalcohol misusealcohol product usealcohol treatmentalcohol usealcohol use disorderalcoholic beverage consumptionalcoholic drink intakealdehyde dehydrogenasesalzheimer modelalzheimer riskassay for transposase accessible chromatin followed by sequencingassay for transposase accessible chromatin seqassay for transposase accessible chromatin sequencingassay for transposase-accessible chromatin with sequencingastrocytic gliabusiness-friendly environmentcareercaspase 14cell typechronic EtOH drinkingchronic alcohol consumptionchronic alcohol drinkingchronic alcohol ingestionchronic alcohol usechronic ethanol consumptionchronic ethanol drinkingchronic ethanol ingestioncognitive defectscognitive functioncollaborative atmospherecollaborative environmentdesigndesigningdevelopmentaldisease associated with agingdisease of agingdisorder of agingdisorders associated with agingdisorders related to agingepidemiologicepidemiologicalepigeneticallyepigenomeepigenomicsethanol consumptionethanol drinkingethanol effectethanol exposedethanol exposureethanol ingestionethanol intakeethanol misuseethanol product useethanol useethanol use disorderexposed to alcoholexposed to ethanolexposure to alcoholexposure to ethanolgenome mutationhippocampalhomesinnovateinnovationinnovativeinteractive atmosphereinteractive environmentinterdisciplinary approachinterdisciplinary atmosphereinterdisciplinary environmentintervention therapyion trap mass spectrometryknockin micemalemalleable riskmass fragmentometrymetabolic phenotypemetabolism disordermetabolomemetabonomemetabotypemicrotubule associated protein tau mutationmicrotubule bound taumicrotubule-associated protein tau mutationmicrotubule-bound taumini-ICEmitochondrialmodifiable riskmolecular profilemolecular signaturemouse modelmultidisciplinary approachmultiomicsmultiple omicsmurine modelmutantmutant taumutation in microtubule associated protein taumutation in microtubule-associated protein tauneuron developmentneuronalneuronal developmentneuropathologicneuropathologic tauneuropathologicalneuropathological tauneuropathologynew therapeutic approachnew therapeutic interventionnew therapeutic strategiesnew therapy approachesnew treatment approachnew treatment strategynovelnovel therapeutic approachnovel therapeutic interventionnovel therapeutic strategiesnovel therapy approachoxidationpanomicspathogenic taupathogenic tau gene mutationpathological change in taupathophysiologypathwaypeer-group atmospherepeer-group environmentpharmacologicpre-clinical studypreclinical studypreparationsprimary degenerative dementiarespiratoryresponserisk mitigationsenile dementia of the Alzheimer typesexskillssnRNAsocial roletautau Proteinstau abnormalitytau associated neurodegenerationtau associated neurodegenerative processtau driven neurodegenerationtau factortau induced degenerationtau induced neurodegenerationtau intronic mutationtau mediated neurodegenerationtau mutationtau neurodegenerative diseasetau neuropathologytau pathological changetau pathologytau pathophysiologytau proteinopathytau related neurodegenerationtau-induced pathologytauopathic neurodegenerative disordertauopathytraittranscriptomicsuRNAunhealthy alcohol usevaporτ Proteinsτ mutation
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Full Description

PROJECT SUMMARY / ABSTRACT
Epidemiological projections indicate a substantial rise in Alzheimer's disease (AD) cases, reaching an

estimated 152 million by 2050. Among the multifaceted factors influencing AD progression, chronic alcohol

consumption is implicated as a modifiable risk factor for AD. My long-term goal is to uncover mechanisms that

contribute to the risk of developing early progression of AD upon alcohol consumption and develop therapeutic

interventions to mitigate this risk. While recent studies indicate metabolic disorders and accelerated aging in

individuals with Alcohol Use Disorder (AUD), energy metabolism emerged as a significantly altered pathway

triggering early AD pathology. This project employs an interdisciplinary approach to understand the impact of

alcohol on the brain, with a specific focus on elucidating the complex relationship between metabolic and

epigenetic function. The overall objective of this study is to comprehend how these factors collectively

contribute to the progression of AD following ethanol exposure. In Specific Aim 1, I will assess the influence of

chronic ethanol exposure on metabolic function and tau pathology in the hippocampus using an AD model

(rTg4510) expressing the mutant human tau MAPTP301L. Specific Aim 2 involves applying cutting-edge

techniques, such as single nuclei multi-omics, to identify cell-type-specific epigenomic and transcriptomic

signatures associated with alcohol-induced early progression of tau pathology. The focus of Specific Aim 3 is

on creating a novel mouse model (rTg4510-ALDH2*2) expressing both human genetic mutations, ALDH2E504K

and MAPTP301L to assess compromised metabolism and its impact on early AD progression. Additionally, we

will investigate the potential rescue from ethanol-induced tauopathy and cognitive deficits using a

pharmacological ALDH2 activator (Alda-1). The innovative findings from this study are expected to reveal the

molecular signatures governing the detrimental effects of ethanol metabolism and their involvement in the

progression or early development of AD. This, in turn, will lay the foundation for novel therapeutic approaches

aimed at mitigating the risk of developing AD due to alcohol consumption. This project provides training in

cutting-edge research skills, including single-nuclei multi-omics, and tailors toward understanding cell-type

specific tau pathology. The University of Iowa is home to experts on neuropathology, Alzheimer’s disease,

computational psychiatry, and molecular biology and offers an ideal collaborative environment for obtaining the

necessary skills to transition into a successful independent research career. During the mentored (K99) phase,

I will engage in activities designed to prepare for independence, including training in scientific presentations,

laboratory management skills, grant writing, scientific peer-review, and interview preparation. This award will

collectively equip me with cutting-edge skills and expertise in metabolic phenotyping, molecular biology, and

tauopathy, ensuring a strong technical and conceptual foundation for starting my independent laboratory

investigating mechanisms for the treatment of alcohol misuse and Alzheimer’s disease.

Grant Number: 7K99AA032034-02
NIH Institute/Center: NIH

Principal Investigator: Nagalakshmi Balasubramanian

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