grant

Adenoviral manipulation of arginine methylation

Organization UNIVERSITY OF PENNSYLVANIALocation PHILADELPHIA, UNITED STATESPosted 1 May 2024Deadline 30 Apr 2027
NIHUS FederalResearch GrantFY2026Ad vectorAddressAdenoviral VectorAdenoviridaeAdenoviridae InfectionsAdenovirus InfectionsAdenovirus VectorAdenovirusesAffinityAreaArginineArginine MethylaseAssayBindingBioassayBiochemicalBiochemistryBioinformaticsBiologic ModelsBiologicalBiological AssayBiological ChemistryBiological ModelsBiologyBiophysicsBusiness-Friendly AtmosphereCalorimetryCell FunctionCell PhysiologyCell ProcessCellular FunctionCellular PhysiologyCellular ProcessChargeChildren's HospitalClinicalCodeCoding SystemCommunitiesConfocal MicroscopyCytoplasmDNA Molecular BiologyDNA ReplicationDNA SynthesisDNA TherapyDNA VirusesDNA biosynthesisDataDepositDepositionEnzyme GeneEnzymesEventFamilyFellowshipFutureGastrointestinal DiseasesGene ExpressionGene Transfer ClinicalGenesGenetic InterventionHistone (Arginine) MethyltransferaseHumanImmune PrecipitationImmunoblottingImmunoprecipitationInfectionKineticsKnowledgeL-ArginineL-LysineLeadLiquid ChromatographyLysineMeasuresMediatingMethylationMicroscopyModel SystemModelingModern ManMolecularMolecular BiologyMolecular CloningMolecular InteractionMolecular VirologyMyelin Basic Protein (Arginine) MethyltransferaseNatureNon-Polyadenylated RNANon-structural ProteinNonstructural ProteinNuclearNuclear ProteinsOncogenicPb elementPediatric HospitalsPennsylvaniaPhenylalaninePhiladelphiaPlaque AssayPoriferaPost-Translational Modification Protein/Amino Acid BiochemistryPost-Translational ModificationsPost-Translational Protein ModificationPost-Translational Protein ProcessingPosttranslational ModificationsPosttranslational Protein ProcessingPrincipal InvestigatorProcessProductionProductivityProtein AnalysisProtein Arginine MethyltransferaseProtein FamilyProtein Methylase IProtein MethylationProtein Methyltransferase IProtein ModificationProtein-Arginine N-MethyltransferaseProteinsRNARNA BindingRNA Gene ProductsRNA ProcessingRNA SplicingRNA and protein interactionRNA boundRNA methylationRNA-Binding ProteinsRNA-Protein InteractionResearchRespiratory DiseaseRespiratory System DiseaseRespiratory System DisorderRibonucleic AcidRoleSite-Directed MutagenesisSite-Specific MutagenesisSplicingSpongesSubcellular ProcessSubstrate InteractionTargeted DNA ModificationTargeted ModificationTechniquesTitrationsTrainingTranscriptUniversitiesVaccinesViralViral DiseasesViral GenesVirusVirus DiseasesWestern BlottingWestern Immunoblottingadeno vectoradenovectorbiologicbiophysical approachesbiophysical foundationbiophysical methodologybiophysical methodsbiophysical principlesbiophysical sciencesbiophysical techniquesbusiness-friendly environmentcareercollaborative atmospherecollaborative environmentcrosslinkdemethylationexperimentexperimental researchexperimental studyexperimentsgastrointestinal disordergene repair therapygene therapygene-based therapygenetic therapygenomic therapyheavy metal Pbheavy metal leadhuman pathogeninteractive atmosphereinteractive environmentinterdisciplinary atmosphereinterdisciplinary environmentinterestmutantnovelpathogenpeer-group atmospherepeer-group environmentprotein blottingprotein expressionprotein functionresponseskillssocial roletherapeutic targettoolviral infectionvirus host interactionvirus infectionvirus-induced disease
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Full Description

Project Summary:
As obligate intracellular pathogens, viruses must hijack cellular machinery to facilitate productive infection. For

DNA viruses that depend on host RNA processing machinery to produce viral transcripts, common targets of

manipulation include both cellular RNA-binding proteins (RBPs) and the enzymes mediating the post-

translational modifications (PTMs) that govern their functions. Arginine methylation is a PTM deposited by a

family of protein arginine methyltransferases (PRMTs) and involved in multiple aspects of RNA processing. While

the roles of arginine methylation and PRMTs constitute an emerging field in multiple areas of biology, relatively

little is known about their functions during viral infection. The objective of this project is to utilize human

Adenovirus (AdV) as a model system to address the roles of arginine methylation during infection. AdV is an

important human pathogen and also well recognized as a tool for investigating fundamental cellular processes.

Preliminary data from the Weitzman lab demonstrate an intriguing global decrease of arginine methylation on

cellular RBPs throughout AdV infection. Concurrently, arginine methylation of late region 4 (L4) 100 kDa

nonstructural protein (100K) dramatically increases as infection progresses. Furthermore, 100K expression is

sufficient to cause relocalization of PRMT1 from its normally nuclear subcellular compartment to the cytoplasm,

an event which correlates with a 100K-dependent loss of arginine methylation on cellular RBPs. Additionally,

methylation of the host RBP hnRNPA1 decreases in response to 100K expression alone. Arginine methylation

of hnRNPA1 is known to regulate its splicing capacity, and AdV is well known to manipulate host splicing

machinery, but knowledge of the role of hnRNPA1 during AdV infection is limited. These collective findings inform

my hypothesis that 100K acts as a molecular sponge of PRMT1 activity, leading to the loss of arginine

methylation of RBPs such as hnRNPA1, and thus regulating this splicing factor’s RNA-binding capacity and

function to promote efficient AdV splicing. In Aim 1 I will determine the requirement of 100K for PRMT

relocalization (confocal microscopy, IP-WB) and decreased hnRNPA1 methylation (isothermal calorimetry, MS-

based competition experiments). In Aim 2 I will determine if 100K impacts hnRNPA1 RNA-binding (eCLIP, RNA

Binding-Region Identification) and splicing abilities (qPCR-based splicing assays, molecular cloning, WB, plaque

assays) to benefit viral infection. This study will be the first to describe a mechanism of viral manipulation of

arginine methylation to promote infection. Results of this proposal will expand our understanding of how

pathogens interfere with PTM machinery, thus informing future studies to develop appropriate therapeutics

targeting arginine methylation to treat viral infections. This research will take place in the collaborative and

interdisciplinary environment of the Weitzman lab and the integrated communities of both the University of

Pennsylvania and the Children’s Hospital of Philadelphia. Skills gained from this training fellowship will prepare

me for a career as a principal investigator investigating molecular processes governing virus-host interactions.

Grant Number: 5F31AI181460-03
NIH Institute/Center: NIH

Principal Investigator: Amber Abbott

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