grant
Thermodynamically Calibrated RNA Simulations to Decode Mechanisms of RNA MolecularRecognition
Organization STATE UNIVERSITY OF NEW YORK AT ALBANYLocation ALBANY, UNITED STATESPosted 1 Sept 2019Deadline 31 Jan 2030
NIHUS FederalResearch GrantFY20253-D3-Dimensional3DBehaviorBindingBiologic ModelsBiologicalBiological ModelsBiosensing TechnicsBiosensing TechniquesCalibrationComplexComputer ModelsComputer SimulationComputer based SimulationComputerized ModelsDataDevelopmentEngineeringGene TranscriptionGenetic TranscriptionIonsLigandsMessenger RNAMethodsMicroRNAsModel SystemModelingModificationMolecular InteractionNanotechnologyNon-Polyadenylated RNANucleosidesNucleotidesPathway interactionsProteinsRNARNA ExpressionRNA FoldingRNA Gene ProductsResearchResolutionRibonucleic AcidSpecificityStructureStructure-Activity RelationshipTechniquesTechnologyTherapeutic InterventionThermodynamicThermodynamicsTranscriptionTransfer RNATriplet Codon-Amino Acid Adaptoraptamerbiologicbiosensingchemical structure functioncomputational modelingcomputational modelscomputational simulationcomputer based modelscomputerized modelingcomputerized simulationdesigndesigningdevelopmentalexperienceimprovedintervention therapymRNAmiRNAmolecular recognitionnano technano technologynano-technologicalnanotechnanotechnologicalnovelpathwayprogramsresolutionsrestraintsimulationsmall moleculestructural biologystructure function relationshipsuccesstRNAthree dimensionaltransfer Ribonucleic acids
Description preview
ABSTRACT
This MIRA proposal details the continued development of improved, thermodynamically
accurate computer models for simulating RNA structures, folding pathways, and molecular
recognition at atomistic resolution. These models differ from existing models for RNA in that
they are calibrated to reproduce solution thermodynamic data on the…
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