grant

Hybrid approach for comprehensive mutation detection in a cell

Organization MAYO CLINIC ROCHESTERLocation ROCHESTER, UNITED STATESPosted 15 Apr 2023Deadline 31 Mar 2028
NIHUS FederalResearch GrantFY2025AddressAnatomic SitesAnatomic structuresAnatomyArtifactsAutopsyBenchmarkingBest Practice AnalysisBiopsyBladderBladder Urinary SystemBody TissuesBone Marrow Blood-Deriving CellBone Marrow Blood-Forming CellBone Marrow CellsCell BodyCell Growth in NumberCell LineCell MultiplicationCell ProliferationCellLineCellsCellular ProliferationCharacteristicsChondrocytesClonal ExpansionClone CellsCloningColonComplexCorneaCryopreserved CellCytogeneticsDNADNA ReplicationDNA SynthesisDNA amplificationDNA biosynthesisDNA mutationDeoxyribonucleic AcidDevelopmentDisadvantagedEndothelial CellsEpitheliumEquilibriumEsophagusExtremitiesFertilized EggFertilized OvumFibroblastsFreezingFrequenciesGeneticGenetic ChangeGenetic defectGenetic mutationGenomeHair FollicleHair follicle structureHaplotypesHeartHeterogeneityHumanHuman FigureHuman bodyHybridsIn VitroIntestinalIntestinesJointsKidneyKidney Urinary SystemLimb structureLimbsLungLung Respiratory SystemMethodsModern ManMorphologic artifactsMosaicismMuscle CellsMutationMutation DetectionMyocytesNatureNetwork AnalysisNon-TrunkOrganPathway AnalysisPhasePolymeraseProgenitor CellsProliferatingProtocolProtocols documentationRepetitive ElementRepetitive RegionsRepetitive SequenceScalpScalp structureSkinSkin TissueSomatic MutationStomachStrains Cell LinesSystemTestingTissue PreservationTissuesWorkbalancebalance functionbenchmarkbiobankbiorepositorybowelcell typecornealcultured cell linecutaneous tissuedevelopmentalentire genomefull genomegastricgenome analysisgenome mutationhuman tissuelong read seqlong-read sequencinglong-read transcript sequencinglow-frequency mutationmelanocytemosaicmosaic diseasesmosaic disordersnecropsynew approachesnovel approachesnovel strategiesnovel strategypostmortempreservationproliferation capabilityproliferation capacityproliferation potentialproliferative capabilityproliferative capacityproliferative potentialrare allelerare mutationrare variantrenalsingle cell analysissomatic variantstem cellssuccessurinary bladderwhole genomezygote
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Abstract
Numerous recent studies have consistently shown that likely no two cells in the human body have the

same genomes, a phenomenon called somatic mosaicism. Mosaicism can be studied using various approaches,

but the study of mutations directly in the cell promises a comprehensive characterization of mosaicism in any

tissue. Analysis of…

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